Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2124 ATGGCTATTAGCATGATGAAGGTTGCATGCGTGGTTGTGATGTGCATGGCTGTGGTGGGAGCGCCGATGATGGCGCAGGCCATGGACTGCAACCAGGTGACGATGAACCTGGCGTCGTGCATACCTTACCTGATGCAGGGAGGAGCGCCTAGAACCGGATGCTGCACCGGAGTCAGGAACATTCTCGGCGCCGCCGGCACCACCGCCGACAAACAGACCGTGTGCAACTGTCTCAAGAACGATGCTACGAGGTACAACATCAATGACAAGTACGCTCAGGCACTCCCTCAACTTTGCAATGTCAATGTCCCTTACAAGATCAGCCGCTCTACCAACTGCGCTAGCATCAAGTTCTGA 357 0.5518 MAISMMKVACVVVMCMAVVGAPMMAQAMDCNQVTMNLASCIPYLMQGGAPRTGCCTGVRNILGAAGTTADKQTVCNCLKNDATRYNINDKYAQALPQLCNVNVPYKISRSTNCASIKF 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2124 118 Pfam Protease inhibitor/seed storage/LTP family 30 113 IPR016140 -
Aed9g2124 118 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 115 IPR036312 -
Aed9g2124 118 SMART aai_6 30 113 IPR016140 -
Aed9g2124 118 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 4 115 - -
Aed9g2124 118 Gene3D - 27 118 IPR036312 -
Aed9g2124 118 ProSitePatterns Plant lipid transfer proteins signature. 95 116 IPR000528 GO:0006869|GO:0008289
Aed9g2124 118 PRINTS Plant phospholipid transfer protein signature 70 85 IPR000528 GO:0006869|GO:0008289
Aed9g2124 118 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Aed9g2124 118 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
Aed9g2124 118 PRINTS Plant phospholipid transfer protein signature 49 63 IPR000528 GO:0006869|GO:0008289
Aed9g2124 118 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Aed9g2124 118 CDD nsLTP1 29 113 - -
Aed9g2124 118 PANTHER - 4 115 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2124 Aed-Chr9 24433640 24434618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2124 5 117 Acyl Lipid Metabolism Gene Families AT2G38540 42.609 4.48e-28 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2124 - - gmx:100798112 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2124 9 24433640 24434618 Aed2g0961 2 7572889 7574924 PCT