Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2123 ATGGCTAGCTTGAAGGTTGCATCATGCGTGGTTGTGATAATGTGCATGATGGCTGTGATGATGAGTGCACCAATGATGGTTCAAGCCGTGTCATGTGATGACGTGATTGTGCACCTGTCTCCGTGCCTATTCTATCTGATACAGGGTGGTTCGGTGCCGGATGTGTGCTGCAACGGAGTGAGAAACATTATGGACGCTGCCACCAACACCTCTGACAAACAAACTGTGTGCAAGTGTCTTCAGCAAGATGCTATTAACTATGGCATCAATGAAGACTACGCTGAGGCCCTCCCTGGCCTTTGCAATGTCAACTTGCCCTATAAGATCAGCCGCTTCGCCAATTGTGACGAGTATGATCATCAGGTTCTAAAGGAGCGGGTAGCTTTGCTAATTTCTGTGGGATACTGA 408 0.4828 MASLKVASCVVVIMCMMAVMMSAPMMVQAVSCDDVIVHLSPCLFYLIQGGSVPDVCCNGVRNIMDAATNTSDKQTVCKCLQQDAINYGINEDYAEALPGLCNVNLPYKISRFANCDEYDHQVLKERVALLISVGY 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2123 135 Pfam Probable lipid transfer 15 107 IPR016140 -
Aed9g2123 135 Gene3D - 29 118 IPR036312 -
Aed9g2123 135 PRINTS Plant phospholipid transfer protein signature 31 47 IPR000528 GO:0006869|GO:0008289
Aed9g2123 135 PRINTS Plant phospholipid transfer protein signature 72 87 IPR000528 GO:0006869|GO:0008289
Aed9g2123 135 PRINTS Plant phospholipid transfer protein signature 88 105 IPR000528 GO:0006869|GO:0008289
Aed9g2123 135 PRINTS Plant phospholipid transfer protein signature 51 65 IPR000528 GO:0006869|GO:0008289
Aed9g2123 135 PRINTS Plant phospholipid transfer protein signature 106 117 IPR000528 GO:0006869|GO:0008289
Aed9g2123 135 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 117 - -
Aed9g2123 135 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED 5 116 - -
Aed9g2123 135 PANTHER - 5 116 IPR000528 GO:0006869|GO:0008289
Aed9g2123 135 PANTHER - 1 117 IPR000528 GO:0006869|GO:0008289
Aed9g2123 135 CDD nsLTP1 30 116 - -
Aed9g2123 135 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 117 IPR036312 -
Aed9g2123 135 SMART aai_6 32 115 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2123 Aed-Chr9 24425863 24426675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2123 10 117 Acyl Lipid Metabolism Gene Families AT5G01870 41.441 9.00e-25 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2123 - - gmx:100306706 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2123 9 24425863 24426675 Aed2g1160 2 9690894 9691265 PCT