Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2093 ATGACCATGGGAGATCATAGTAACTGGGGAACTTCAGAACTTAATCATAACCAAATTGGACTTGATGTTCCAAAATTCAAGTCTGTTCAACCTCCCTCACTACCTCTCTCTCCCTCTCCAATATCCCCTTCTTCTTACTTGGCCTTCTCATCTGCTTTCAGCCCATCTGAGTTCTTGAACTCAGCTTTGTTTTTTCCTTCTCCAAATATTTTTGCATCTCCTACTACTGAGGCTTTGGTTGGCCAGAGCTTCAACTGGAGGAACGGTTCAGGTGAAGAACAACAACAACGTGACAAGGTGGATGAGAAAAACTACTCTGACTTCTCTTTCCAAACCCAAATTCAATCTTCCTCAACCATGTTTCAAGTGCAGGAACAACTTAAGAAACAAGACATGTGGAAATTCAATGAGCCTACAAAACAATCTGATTTTGCATCTGAGAGGACAGAAACAAAATCTGAATACCCTTCAATTCAGAGATTTTCCTCAGAAATTGCAGCAGGAAAACCAGAAATACAAAGCAATTCAGCTCCTGGGTCTGGTTATTTTGACTACACAAGTGCATCTCAGACTGTTAGAGAACAAAAGAGAACAGAAGATGGGTTCAACTGGAGAAAATATGGACAGAAACAAGTGAAAGGGAGTGAAAATCCTCGTAGTTATTACAGGTGCACACATCCAAATTGCTCAGTGAAGAAGAAAGTAGAGAAGACTTTAGATGGACAAATTACTGAAATAGTATATAAGGGCCAACATAACCACCCGAAACCTCAGTCTACTAGAAGAACAAACTCTCAATCAGTTCATCAACCTTCTTCATCTTGCACAAACTCAGGGATTTCTGATCAGTCAGTGGTGACTCTAGGCAATCCACAAATGGATCATTTCTCCATTCAAGAAGATTCTTCAGCTTCTGTTGGAGAGGAAGAGTTTGAGCAAACATCCCAAACCAGTTATTCTGGAGGAGATGAAGATAACCTTGGACCAGAGGCCAAAAGATGGAAGGGAGATAATGAAAATGATGGCTATTCTGCCTCAGGGAGTAGAACTGTTAGAGAGCCTAGAGTTGTAGTTCAAACCACAAGCGAAATCGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTAGTCAAAGGAAACCCAAATGCAAGGAGCTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGAAAACATGTTGAGAGAGCTGCACATGATATCAAAGCTGTGATCACAACTTATGAAGGGAAACACAACCATGATGTGCCTGCTGCACGTGGTAGCGCAGGTTATAACATGAACAGAAATTCTCAGAACAGCAACATAGCGGCGCCTATTAGACCCTCGGCAGTTAACTGTTATAATTCTAGCTCATCAAGTTTCACAAATTCTCTCTATAATAATACTACTAGGCTTCCAGCAACTGGAAATCAAGAACCATTTTCACTTGACAAGTTCAAGAGCCCTGGAAGTCTTGGCTATTCGTCTCTTAAAAAATCAATGGGTTCATTTACCAATCATGCACAGTACTCAGATGCTGCATACTCAAAGGCCAAGGATGAGACGAAGGATGACTCATTCCTTCAGTCATTTCTCTCAAATGACTTCTAA 1623 0.4104 MTMGDHSNWGTSELNHNQIGLDVPKFKSVQPPSLPLSPSPISPSSYLAFSSAFSPSEFLNSALFFPSPNIFASPTTEALVGQSFNWRNGSGEEQQQRDKVDEKNYSDFSFQTQIQSSSTMFQVQEQLKKQDMWKFNEPTKQSDFASERTETKSEYPSIQRFSSEIAAGKPEIQSNSAPGSGYFDYTSASQTVREQKRTEDGFNWRKYGQKQVKGSENPRSYYRCTHPNCSVKKKVEKTLDGQITEIVYKGQHNHPKPQSTRRTNSQSVHQPSSSCTNSGISDQSVVTLGNPQMDHFSIQEDSSASVGEEEFEQTSQTSYSGGDEDNLGPEAKRWKGDNENDGYSASGSRTVREPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSAGYNMNRNSQNSNIAAPIRPSAVNCYNSSSSSFTNSLYNNTTRLPATGNQEPFSLDKFKSPGSLGYSSLKKSMGSFTNHAQYSDAAYSKAKDETKDDSFLQSFLSNDF 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2093 540 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 285 IPR044810 GO:0003700
Aed9g2093 540 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 302 537 IPR044810 GO:0003700
Aed9g2093 540 Gene3D WRKY domain 184 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed9g2093 540 Gene3D WRKY domain 354 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed9g2093 540 MobiDBLite consensus disorder prediction 299 323 - -
Aed9g2093 540 SMART WRKY_cls 198 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g2093 540 SMART WRKY_cls 367 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g2093 540 MobiDBLite consensus disorder prediction 248 287 - -
Aed9g2093 540 ProSiteProfiles WRKY domain profile. 362 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g2093 540 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 14 285 - -
Aed9g2093 540 ProSiteProfiles WRKY domain profile. 193 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g2093 540 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 302 537 - -
Aed9g2093 540 SUPERFAMILY WRKY DNA-binding domain 192 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed9g2093 540 MobiDBLite consensus disorder prediction 299 351 - -
Aed9g2093 540 MobiDBLite consensus disorder prediction 253 287 - -
Aed9g2093 540 Pfam WRKY DNA -binding domain 368 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g2093 540 Pfam WRKY DNA -binding domain 199 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g2093 540 SUPERFAMILY WRKY DNA-binding domain 359 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2093 Aed-Chr9 24153826 24156856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2093 21 536 WRKY Transcription Factor Family AT2G38470 44.891 8.85e-118 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed9g2093 WRKY 1.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2093 K13424 - gmx:100776837 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2093 9 24153826 24156856 Aed9g2093 9 24153826 24156856 ECH