Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2080 ATGATGCAGCAAGAGGAAGTTCAATCCGCATGGCCATTCTTTGAAAACATGAACTCAACTTTTGATCAAGGTGTTGAGTTTGAGTCCTATGACTTCACCACCATGTATGACCATGCTGATGATTGTGAACTCAATACTCTATTGACCAATCTAGATGATTCCACTTCTGAAATTTGTTCTATCTCCTTTCCTTCCTCTCCCATAATATTCCCCAATGATTATGATCATAATCATGATCATATTCATATCCAATACCCAATCAATGAAGAAACCTTGCAACTTCCATCATTGATGGAATTGGATGATTTTGACAACTCCATCTTGGATACTCAAATTACTAGTATCCAAGGTCATGGAGAGAGTGAAGGGAGCTTCTTCCCTTCAAAGAATTTGTCTAGTGAGGTGGAAAATATTGTTGCATGGAGTCCAACCCCATCTGTGAGGTCAGAGTTGTCCACAAACCAAACATCATCACCATTGACTTTGCCACAAGAAAACATGGAGATTGAAAGCCAAGTGAGCCTTCAACACTTGCTGAAGGCCTTTGGAGAGGCCTTGGAGCAAGGCCAAGTGAGCCTTCAAGAAGTGATTCTGAGACGCTTAAGCCAGCAAGCTACCCCACTTGGTGAGTCTCTAGAGCGAATTGCATTTTACTTGTCTCAAGTCATGGCCAATCATGGAGACTATCTCAAAGGAGAGGCCTTTAAGAACTTTGAGGCTGCTTTGAGGGCACTCTATCAAGGGCTTCCAATTGGGCAAATTGCTCACTTTGCTGCTGTTTCAGCAATTCTTGAAGCTTTGCCACAAGATTGTGATGTTGTGCACATAGTGGACTTTTGTATTGGACATGGTGTTCAATGGCCTGCAATGATTGAGGCTGTTGCACACATGGGAAAAAAATTGAAATTGACATCAATCAAATTAGGTGGTGAGGGCCATGAATGTGTCTCTAGTCTATCCAATTTTGAGGAACTACATGAGCATGCTAAATCCTTTGGTTTGAAGTTGAAAGTGGAGGAAAAAGGAGTGGGGGAACTTGTTACTGAGATTAAAAGAATGAACAAAAGGGGTGGGAGAGGAGAGTTTTTGGCCTTTAACTGCATGATTGATCTCGCACATATGGGAAAAGTAAGGAGCAGGAAACATGCCTTAGAGTTTCTAAGGGTGGCAGAGGATTTGATCAACACCTCTGGCAACAGGGGCATCATCACTTTTGGGGATGGAGGTGCTTATGAGAAAGTGAAAAACAACATGAATTTCAGTTCATGTTTTGATGGACACTTGGTGCATTACCAATCCTTGTTAGAAGCAATTGAGTCACACTTCCCAACCCGTTTCTCAGAAGCAAGAATTGCCATGGAGCAATTGTTTTTGCAACCTTGCATCTCTTCTCTTGATTGGTTGCAAACATGGGAGGAGATGAAAAGTGGTGGCTGCCATCTTGAGGCAGAGATTATTAGCTTAGAGGGTTGCCAATTGAGCAAAAGTATTTTAATGGAAATAAGAGAAGTGTTGAGAGGAAGTGAAGGTTCATATCAGGCCAGGATTGAAGGACAAAATGAGAATGAACTAGTTTTGGAGTACAAAGGAACTCAACTCTTGAGATTTTCAACTTGGAAAAACTAA 1626 0.4157 MMQQEEVQSAWPFFENMNSTFDQGVEFESYDFTTMYDHADDCELNTLLTNLDDSTSEICSISFPSSPIIFPNDYDHNHDHIHIQYPINEETLQLPSLMELDDFDNSILDTQITSIQGHGESEGSFFPSKNLSSEVENIVAWSPTPSVRSELSTNQTSSPLTLPQENMEIESQVSLQHLLKAFGEALEQGQVSLQEVILRRLSQQATPLGESLERIAFYLSQVMANHGDYLKGEAFKNFEAALRALYQGLPIGQIAHFAAVSAILEALPQDCDVVHIVDFCIGHGVQWPAMIEAVAHMGKKLKLTSIKLGGEGHECVSSLSNFEELHEHAKSFGLKLKVEEKGVGELVTEIKRMNKRGGRGEFLAFNCMIDLAHMGKVRSRKHALEFLRVAEDLINTSGNRGIITFGDGGAYEKVKNNMNFSSCFDGHLVHYQSLLEAIESHFPTRFSEARIAMEQLFLQPCISSLDWLQTWEEMKSGGCHLEAEIISLEGCQLSKSILMEIREVLRGSEGSYQARIEGQNENELVLEYKGTQLLRFSTWKN 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2080 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 540 IPR005202 -
Aed9g2080 541 Pfam GRAS domain family 175 540 IPR005202 -
Aed9g2080 541 ProSiteProfiles GRAS family profile. 166 540 IPR005202 -
Aed9g2080 541 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2080 Aed-Chr9 24016558 24018183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2080 198 465 GRAS Transcription Factor Family AT5G66770 26.596 1.46e-15 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed9g2080 GRAS 1.2e-34 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2080 - - gmx:100784347 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2080 9 24016558 24018183 Aed9g2080 9 24016558 24018183 ECH