Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2079 ATGGCTTCTCCAAGTACTACTCTTCATGTCTTCCTCCTATTATTTCTCCCTCTCTTGTTATTACACCAAGTTGCCTCCAATGATAATAAGCCTTTGTTCTATGAAGGGTTCGACATGGATGACAAGACTGAACTCAACCTCGAAGGATCTTCCATCATCAAAACCAGCCGTTTACTTAAACTCACAAACAGATCAACCAACATCGTAGGCCATGCATTCTACAACACACCCTTTACAATGCTCAACAAAACAATCTCTTCTTCACATGGTTATTCCTTCAGCACCAACTTTGTTTTCTCAATTGTTTCCCCAAGTTCTGGCTCTGGGGGCTTTGGCCTAGCCTTCACCATAGCAGCCTCAACGCAGTTTCTGGGGGCTGAGGCTGGCCACTATCTTGGCCTTGTCAACTCCTACAATGATGGAAATGCCTCAAACTACATCTTTGCAGTTGAGTTTGACACGGTGAATGGCTACAAAGGTAACTCGGACTCCGAAGGGAACCATGTTGGGGTCAACAAGAATGGCGTGGACTCGATTAAAACTGAGCCAGCTGCGTATATTGAAGAGGGAACTGATGGTGTAAAGGAGGATTTCAGAATGGCCAAGGTTGATGCTGTCCAAGCTTGGATTGATTACGATGGCCAAAAGAAAACTCTGAATGTTACAATTGCTCCTTTTTCGATTCCTAGGCCAAGCAAACCGCTCATAGAGGATTATGTAATTGATCTTGAAAGTGTTATGAAGGAAAACATGTATGTTGGTTTCTCAGCATCAACGGGGGCGCAGGAATCAAGCTCTCACTATCTTCTAGGATGGAGCTTTGCAGTGAACGGTACTGCCCGTCAACTGAATGTTTCTAATCTTCCGGAGCCGCCTCCCAAGGAGAAGGATCCAACCTCGTTTCCTTGGATCAACGTTGCAATAGGGGTGTTGTCTGCTTTCACTTTTTGCCTCTTGTGTATTCTGTTTTTTGTAACATGTTATAGGAGATACACGGATTTCGAGGTTCTTGAGGATTGGGAGATGGACTGTCCTCACAGGTTTAGGTACAAAGATCTTCACTTGGCAACAAAGGGTTTTGTGGAGAGCCAGCTGATTGGAGTTGGAGGCTTTGGTGCTGTGTACAAAGGTGTGTTGCCTAATTCCACAGGTACTGAGGTTGCTGTCAAGAGGATTGTGAGGAGTCCTTATCATGGAATGAGGGAGTTTGCAGCTGAGATTGAAAGCTTGGGAAGGTTGAGGCACAAGAATTTGATTAACCTTCAAGGGTGGTGCAAGAAAAAGAATGATCTACTCTTAATCTATGATTTCATTCAAAATGGAAGCCTTGATTCTGTCCTACATAACAACAACTTTGTTTTGAATTGGGAGCAAAGATTCAACATTTGCAAAGGCATCAGTGCTGGACTATTGTACCTGCATGAGGAGTGGGAGCAAGTGGTGATCCATAGAGACGTGAAAACTAGTAACATTTTGATAGATGCAGATTTGAATGCACGTTTAGGTGACTTTGGACTTGCAAGGCTATACAACCATGGTCAAGTGTCACACACAACCAGGGTGGTTGGCACTATTGGCTACATTGCACCGGAGCTAACTCGCACGGGGAAGGCTTCCACAAGCACGGATTTGTATGCATTTGGTGTTGTGCTACTTGAATTGGCCACAGGAAAGAGGCCTCTTGATTCGGATCAGTTTTTCTTAGTAGAGTGGGTTGTCGAGAGTTACCATTTGGGTCAAATTCTTGAGGTGGTTGATCCTAAGCTTAATTCAGTTTATGATGAGGAAGAAGTTGAGTTGGTTCTCAAGTTGGGTCTACTTTGCACTCAACATAGAGCAGAATATAGACCTACCATGAAACAAGTTACAAGGTACTTAAACTTTGATGACCCTCTTCCTGATATTGCTGATTGGGGACATGGTGTGTCTACTGGGAGCAGTAGATTGAGCTCAGGTTTCTTAGAAGTCACGTCACCTGGGGGAATTGTTGTAACATCGGGATATTTGTCTTCCATTAGCATGGGCACCAACTCCATAGAGGCTGGTAGATAG 2052 0.4415 MASPSTTLHVFLLLFLPLLLLHQVASNDNKPLFYEGFDMDDKTELNLEGSSIIKTSRLLKLTNRSTNIVGHAFYNTPFTMLNKTISSSHGYSFSTNFVFSIVSPSSGSGGFGLAFTIAASTQFLGAEAGHYLGLVNSYNDGNASNYIFAVEFDTVNGYKGNSDSEGNHVGVNKNGVDSIKTEPAAYIEEGTDGVKEDFRMAKVDAVQAWIDYDGQKKTLNVTIAPFSIPRPSKPLIEDYVIDLESVMKENMYVGFSASTGAQESSSHYLLGWSFAVNGTARQLNVSNLPEPPPKEKDPTSFPWINVAIGVLSAFTFCLLCILFFVTCYRRYTDFEVLEDWEMDCPHRFRYKDLHLATKGFVESQLIGVGGFGAVYKGVLPNSTGTEVAVKRIVRSPYHGMREFAAEIESLGRLRHKNLINLQGWCKKKNDLLLIYDFIQNGSLDSVLHNNNFVLNWEQRFNICKGISAGLLYLHEEWEQVVIHRDVKTSNILIDADLNARLGDFGLARLYNHGQVSHTTRVVGTIGYIAPELTRTGKASTSTDLYAFGVVLLELATGKRPLDSDQFFLVEWVVESYHLGQILEVVDPKLNSVYDEEEVELVLKLGLLCTQHRAEYRPTMKQVTRYLNFDDPLPDIADWGHGVSTGSSRLSSGFLEVTSPGGIVVTSGYLSSISMGTNSIEAGR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2079 683 Gene3D Transferase(Phosphotransferase) domain 1 438 630 - -
Aed9g2079 683 Gene3D - 33 285 - -
Aed9g2079 683 SMART serkin_6 360 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2079 683 ProSiteProfiles Protein kinase domain profile. 360 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2079 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Aed9g2079 683 CDD lectin_legume_LecRK_Arcelin_ConA 34 278 IPR001220 GO:0030246
Aed9g2079 683 Pfam Protein kinase domain 361 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2079 683 ProSitePatterns Protein kinases ATP-binding region signature. 366 390 IPR017441 GO:0005524
Aed9g2079 683 PANTHER - 12 648 - -
Aed9g2079 683 CDD STKc_IRAK 366 627 - -
Aed9g2079 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 293 IPR013320 -
Aed9g2079 683 Gene3D Phosphorylase Kinase; domain 1 330 437 - -
Aed9g2079 683 SUPERFAMILY Protein kinase-like (PK-like) 343 629 IPR011009 -
Aed9g2079 683 Pfam Legume lectin domain 34 288 IPR001220 GO:0030246
Aed9g2079 683 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 12 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2079 Aed-Chr9 24005442 24007493 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2079 32 644 Receptor kinase-like Gene Family AT5G01560 49.120 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed9g2079 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2079 - - gmx:100791358 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2079 9 24005442 24007493 Aed9g2079 9 24005442 24007493 ECH
Aed9g2079 9 24005442 24007493 Aed2g1077 2 8697655 8700913 PCT
Aed2g1419 2 15860085 15865357 Aed9g2079 9 24005442 24007493 PCT