Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2071 ATGACCGTTACCCTCTTCATCTTTCTTCTCTTCTTCCTTTTGTTTTTCCATCCCGCCGTTTCTCTCTCCTCCGACGGCATCGCGCTTCTCACTCTAAAGTCCGCCGTGGACGCCTCCTCCGCCGCTGCGTTCTCCGACTGGAACGACGCCGACGCCACGCCTTGCCGGTGGGCCGGCATCACGTGCGCGAACATCTCCGGGTTCCCGGAGCCGCGAGTCGTCGGCGTCGCGCTCTCCGGCAAGGGCCTCCGCGGCTACCTCCCTTCGGAGCTCGGCACGCTCCTCTACCTCCGCCGCCTCAACCTCCACACCAACGCCCTCCGCGGCGCCATTCCGGCGCAGCTCTTCAACGCCACCGCGCTCCACAGCGTCTTCCTCCACGGCAACAATCTCTCCGGCAACCTCCCTCCCTCCGTCTGCACCCTCCCCCGCCTCGAAAACCTCGACCTCTCCGACAACGCCCTCTCCGGCGCCATCCCCGGCACGCTCCAAAACTGCTCCAACCTCCAGCGGTTAATCCTCGCCCGGAACAAATTGTCCGGCAAGATTCCGGCGATACCGTGGCCGGAGCTGAAAAACCTTGTCCAACTCGACCTTTCATCGAACCTTCTAGAAGGTTCAATCCCCAACCAGCTCGGCGAACTTAAAACCCTAACCGGAACCCTGAACCTCTCATTCAACCACTTATCTGGTAAAATTCCTAAATCACTTGGAAATTTGCCTATTACCGTGAGTTTCGATCTTAGGAACAATGATTTGAGCGGTGAGATTCCCCAAATGGGGTCGTTTTCAAACCAGGGCCCCACCGCGTTCCTCAACAATCCGAACCTTTGTGGGTTTCCTCTACAGAAGCCCTGCGCAGGTTCGGCACCGAGTGAACCGGGTCTCAGTCCCGGTTCTCGCGATCCGGCACACCGGTCTGCGAAGGGACTGAGTCCCGGTTTGATTATTTTGATCTCGGTGGCGGATGCCGCCGGAGTGGCCTTGATTGGACTTGTGGTGGTTTATGTTTATTGGAAGAGGAAGGGCAAGTCCAATGGGTGTAGCTGCACTTTGAAGAGGAAGTTTGGTGGAGAGAGTGAGAAATTGAGTTTGTGTTGTTGGTGTAATAGGGTGAAGAGTGATGATTCTGAGATGGAGGAGGGGGAGAAGGGAGAGGGGGAGAGTGGGAGAGGGGAAGGGGATTTGGTGGCCATTGATAAAGGTTTTAACTTTGAGCTTGATGAGTTGTTGAGAGCTTCTGCTTATGTGTTGGGGAAGAGTGGGTTGGGGATTGTGTACAAGGTTGTGCTTGGGAATGGGGTGCCTGTGGCTGTGAGGAGATTGGGGGAGGGTGGGGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAAGCCATTGGCAAAGTGAAGCATCCCAACATTGTGAAGTTGAGAGCATATTATTGGGCTCCTGATGAGAAGCTCTTGATCAGTGATTTCATCTCCAATGGCAATTTGGCCAATGCCCTTAGAGGGAGAAATGGTCAACCATCTCCGAAACTTTCATGGTCAACCAGGCTGAAAATCATCAAAGGAACAGCCAGGGGGTTGGCCTATCTCCATGAATGCAGTCCAAGAAAGTTTGTTCATGGTGACATCAAACCCTCCAACATCCTTCTTGACACGGACTTCCAACCCCGCATTTCTGATTTTGGTCTCAACAGGCTGATCAGCATCACAGGCAACAACCCCTCCTCTGGTGGCTTTATGGGAGGAGCTCTTCCTTACTTGAAGCCAACACAAACAGAGCAAACTAACAACTACAAAGCCCCTGAGGCTCATGTCCCGGGTTGCAGACCCACCCAGAAATGGGATGTGTATTCATTTGGAGTTGTGTTACTTGAATTGCTTACTGGGAAGTCCCCGGACTCTTCTCTGGCTGCATCAACTTCCATGGAAGTCTCTGACTTGGTGAGATGGGTTAAGAAAGGGTTTGAACAAGAAAGTCCATTGTCTGAAATTGTTGATCCGTTGATGCTCCATGAAGTGCATGCCAAGAAAGAGGTAGTGGCCGTGTTTCATGCAGCTCTACAATGCACTGAGGGAGACCCTGAGGTCAGGCCTAGAATGAAAACCGTCTCTGAAAATCTTGAAAGAATTGGATCATAA 2130 0.53 MTVTLFIFLLFFLLFFHPAVSLSSDGIALLTLKSAVDASSAAAFSDWNDADATPCRWAGITCANISGFPEPRVVGVALSGKGLRGYLPSELGTLLYLRRLNLHTNALRGAIPAQLFNATALHSVFLHGNNLSGNLPPSVCTLPRLENLDLSDNALSGAIPGTLQNCSNLQRLILARNKLSGKIPAIPWPELKNLVQLDLSSNLLEGSIPNQLGELKTLTGTLNLSFNHLSGKIPKSLGNLPITVSFDLRNNDLSGEIPQMGSFSNQGPTAFLNNPNLCGFPLQKPCAGSAPSEPGLSPGSRDPAHRSAKGLSPGLIILISVADAAGVALIGLVVVYVYWKRKGKSNGCSCTLKRKFGGESEKLSLCCWCNRVKSDDSEMEEGEKGEGESGRGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSPKLSWSTRLKIIKGTARGLAYLHECSPRKFVHGDIKPSNILLDTDFQPRISDFGLNRLISITGNNPSSGGFMGGALPYLKPTQTEQTNNYKAPEAHVPGCRPTQKWDVYSFGVVLLELLTGKSPDSSLAASTSMEVSDLVRWVKKGFEQESPLSEIVDPLMLHEVHAKKEVVAVFHAALQCTEGDPEVRPRMKTVSENLERIGS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2071 709 Pfam Leucine rich repeat 143 204 IPR001611 GO:0005515
Aed9g2071 709 SUPERFAMILY Protein kinase-like (PK-like) 417 704 IPR011009 -
Aed9g2071 709 Gene3D Ribonuclease Inhibitor 187 288 IPR032675 -
Aed9g2071 709 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Aed9g2071 709 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 708 - -
Aed9g2071 709 Gene3D Ribonuclease Inhibitor 23 186 IPR032675 -
Aed9g2071 709 SUPERFAMILY L domain-like 23 283 - -
Aed9g2071 709 Gene3D Transferase(Phosphotransferase) domain 1 488 707 - -
Aed9g2071 709 PRINTS Leucine-rich repeat signature 145 158 - -
Aed9g2071 709 PRINTS Leucine-rich repeat signature 191 204 - -
Aed9g2071 709 Pfam Protein kinase domain 417 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2071 709 ProSiteProfiles Protein kinase domain profile. 412 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2071 709 Gene3D Phosphorylase Kinase; domain 1 400 487 - -
Aed9g2071 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 708 - -
Aed9g2071 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Aed9g2071 709 SMART LRR_typ_2 94 118 IPR003591 -
Aed9g2071 709 SMART LRR_typ_2 191 215 IPR003591 -
Aed9g2071 709 SMART LRR_typ_2 142 165 IPR003591 -
Aed9g2071 709 CDD STKc_IRAK 418 707 - -
Aed9g2071 709 SMART serkin_6 416 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2071 Aed-Chr9 23935001 23940952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2071 18 707 Receptor kinase-like Gene Family AT1G67510 69.504 0.0 977
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed9g2071 Pkinase 4.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2071 - - gmx:100795021 1275.77