Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2069 ATGAAGACTAATAATCATAACGTTTCTGGGGAGAGGAAATCACGGAAGAGACGCAGTGGTGTAAGTGATTCCGTGGAAGACACACTTTCAAAGTGGAAAGAGTACAATAGGAAGCAACAACTTGGGTCTAGAGAAAATGGTGTGGAAGTGATTCACAAAGTTCCTGCAAAAGGGTCAAGAAAAGGGTGCATGAGAGGTAAGGGAGGGCCTCAGAACTCAGATTGCAAGTTCAGAGGTGTAAGGCAGAGGATTTGGGGCAAATGGGTTGCTGAGATTCGTGAACCTATCAATGGAAAGCTTGTTGGTGAGAAAGCAAATAGGCTTTGGCTTGGTACTTTCTCCACTGCACTTGAAGCTGCTCTTGCTTATGATGATGCAGCTAAGGCCATGTATGGCCCTTGTGCCCGTTTGAATTTTCCTGAGCCAATAGAAGACTCTAATGGATCATCATCATCGTTGTCATCATCATCTAGTGGAAGTGATAAGAAGTCACCACCAAGTGATTCTTCTACTGAGAATGGTGGTGATGATGTTGCAAAAGCTGAGGAGTTGGAGGGGAGCATTCATCGGTGTTGCAAAGAGAAACGGATTCTTTCTGGAGGTTGTGTGGCTGATGACTCAATAGAGGAGTGGAAGGAAATCACAACTGGCTTTGAAAAGTGTCAAACAAGTGAAGAATGTGAGGCAGCAACAACTTTGAGGAGTGTTAAGTCTGAAGTAGGTGGTGGAGAAAGTGAGGGAATAGTGAGAGAATTGGAGGAGGTTGTGAAAAACTCTTGCATAGGTGAAGAGGGTAATCACTTGCAAAAGGAGCATATGGATATAGCAATGAATACAAGAGGTAACTATTGTAGCTATTCTGATGCTGCTAGTGAACATGAGATTCTGGTAAAGAGTGAAGAAACAAGAGGGGAATCAATTGAAGCTTTGAACCATTGCCTTGGATATATGCATAATATGCTGCAAGATACAAATCCAAGGCCAAATTCTGAGGCATCATCTATTGCAAAGAAACATACTGAGGAAGTGATTTCTGAAATCCTGGGACTATGTCACAGCAAGTGCATGAAAATCAGCCATGGTGAGTCACCAAATGACCAAAACTATAGAAGAAGTGAACATTTTGATGAGATGAGAACCAAGCTTAAGGGTTTGGAATTGGAATGCAAGCTAAAAGCACATTCTATTCATTACAAGAATCAGCAGGCACCAATAGTAGGAGACTCCAACAACCATCCTTCTATGATGCAGGGAATGCAAGTTGAAGCTTTGAGCGACATCAACAACACAAACAGAAATTCACTACCTGGCCACAGTAGAAAGTTCTGTGATCTTTCTCAACAGCTACACAAGCATTGGAATGGTGTGCAGTTTGCAGACTTGGAAGGTGGTTATGATTACAGTTTCTTAAATCCCGATTATGATTTTGGCTTATTGGAAGAACAGAAGTTACTTGATATATGCTTTCCACATGTTGGATCTTAG 1485 0.4195 MKTNNHNVSGERKSRKRRSGVSDSVEDTLSKWKEYNRKQQLGSRENGVEVIHKVPAKGSRKGCMRGKGGPQNSDCKFRGVRQRIWGKWVAEIREPINGKLVGEKANRLWLGTFSTALEAALAYDDAAKAMYGPCARLNFPEPIEDSNGSSSSLSSSSSGSDKKSPPSDSSTENGGDDVAKAEELEGSIHRCCKEKRILSGGCVADDSIEEWKEITTGFEKCQTSEECEAATTLRSVKSEVGGGESEGIVRELEEVVKNSCIGEEGNHLQKEHMDIAMNTRGNYCSYSDAASEHEILVKSEETRGESIEALNHCLGYMHNMLQDTNPRPNSEASSIAKKHTEEVISEILGLCHSKCMKISHGESPNDQNYRRSEHFDEMRTKLKGLELECKLKAHSIHYKNQQAPIVGDSNNHPSMMQGMQVEALSDINNTNRNSLPGHSRKFCDLSQQLHKHWNGVQFADLEGGYDYSFLNPDYDFGLLEEQKLLDICFPHVGS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2069 494 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Aed9g2069 494 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
Aed9g2069 494 SMART rav1_2 76 146 IPR001471 GO:0003700|GO:0006355
Aed9g2069 494 CDD AP2 75 141 IPR001471 GO:0003700|GO:0006355
Aed9g2069 494 Gene3D AP2/ERF domain 75 141 IPR036955 GO:0003700|GO:0006355
Aed9g2069 494 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 5 395 - -
Aed9g2069 494 SUPERFAMILY DNA-binding domain 76 141 IPR016177 GO:0003677
Aed9g2069 494 MobiDBLite consensus disorder prediction 142 177 - -
Aed9g2069 494 ProSiteProfiles AP2/ERF domain profile. 76 140 IPR001471 GO:0003700|GO:0006355
Aed9g2069 494 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 395 - -
Aed9g2069 494 MobiDBLite consensus disorder prediction 143 174 - -
Aed9g2069 494 Pfam AP2 domain 75 132 IPR001471 GO:0003700|GO:0006355
Aed9g2069 494 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2069 Aed-Chr9 23925565 23927668 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2069 1 160 AP2-EREBP Transcription Factor Family AT2G40340 52.469 4.25e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed9g2069 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2069 - - gmx:100500303 673.315