Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2046 ATGCAAATGGTTGAAACCTTTTACATGTATTTGTTTTTGCTGCTCCTTGTATTCTTTGAAACCTGTCATGCAGCTTGTGTTCCTTCTTCCTGTGGCAGCATCCATAACATACGCTACCCTTTCCGGCTAGACGATGATCCAGAAGACTGCGGTATCTTCAGCTACACTTTATCCTGCAAGAACAACCTCACAGTGCTGTACCTAAATTCAATCAAATACTGTGTGAAGGAAATCGATTACAGCAAGTACATAATCCGAGTGGTAGATTCAAATATTGAGGAGAATAGTTACTCATTTCTTCCTCGTTACTCTCTGGCTGCATTTAACTTCACCTCCGATAGTAATAATTATCAATATAGATATGATCAGACACGGTCGTATTTATCCAACGCTTCATATTGGTTGCCAATCATCCATGAAAAAACTTACCAACTGTCAAAGCTTGTAACATATTTGAGTACTGAAAGCACAATAAACTCTTCGTCGAGGTACGTGGAAATTGGTGGGTGCGTGAATGATGATTATTCTTCATGGCATGCAAAATCGGAGAATAACAAAAGGAGGCTTTATATTAGTGTTGGAGGCAACTATTTGAGGGATTTGAGGCTAGTTGATGAGTATCGTGTAGAGATGATATACATGACGTCGTGGCCTGGCGCTTTTAAAGATCACATAAGCACTTCCTGCAGCGATATTCGAAAGGGATTGGAATATGGTGTTGAGCTTTCGTGGCTAGAAGGTGTCTGTGGGGGTGGGGACGAGAGGATCAAAAACCGTTACAAACTCCCACCACTGGTTGAATCCGACAATGTTTGTAGCCTTGCCTCGCCCTACATACCAGGACCGTTTGATTATTTCCGTGGACTTGTGGTAGGACTATATGAGTTGCATCATGGCAAGGATTTGCTGACATCATCTGTAAGTGGTTTTACGGAAACAGCACAATACTACCTAGGACGATTCACAGCACGGTTTGTTCTCCCACTATACCTTATCTTCAGAATTGTGTCTGGGGTTTCATTTGTGATCGGCATTTTCATCACCGTATTTAGTAGAAGACATTTATCAACATACGAAAACATTGAAGCTTTTCTGCAAGATAATAGGCATAGCCTTATGCCTATAAGGTACTCTTATTCAGAAATTGTGAACATGACCCGAGGTTTTGATGATAAGTTGGGTCAAGGGGGCTTTGGATCTGTCTACAAGGGGAAGCTACGCAGCGGACTTCATGCTGCTATAAAGATGTTAGAAAAATCCAATACCAATGGCCAAGATTTTATCAGTGAAGTCGCAACCATCGGAAGGATACACCATGTGAATGTGGTTAGGCTTTTTGGATATTGCGTTGAGGGATCCAAGCGTGCACTTGTTTATGAATTCATGCCCTCTGGTTCTCTTGACAGGTATATATTTCGTAAAGAAGAAAGTACCACCTTAACATGTGATCAAGTATATCAAATATCCCTTGGGGTAGCCCGTGGGATTACTTACTTGCATGAGGGGTGTGACATGCAAATTCTACACTTTGACATCAAACCCTACAACATTCTTCTTGATGAAAATTTCGTTCCAAAGATTTCAGATTTTGGACTTGCAAAACTATATCCCATAAATGATAGCATCATCGTTTTGACTGCTGCAAGAGGCACAATTGGCTACATGGCTCCAGAATTGTTCTATAAGAATATAGGAGCAGTCTCCTTCAAGGCTGATGTTTACAGCTTTGGAATGTTGTTGATGGAAATGGCACATAGACAGAAGAATGTGAATTCACATGCAGAAAACTCAAGTCAAGTTTTCTTTCCTACTTGGATTTATGATCAATTTTATAAAGGAGAAGACATAGAATTGGATGATAGCACAGAGGAGGAAAATAAAGTAATAAAGAAGATGATCATAGTTGCACTATGGTGTATTCAGTTAAAACCATGTGACCGTCCTTCAATGAAAAAAGTAGTTGAGATGCTAGAAGGAGAACTTGATATCCTAGAAATGCCTCCAAAGCCTTTGTTGTATCCAGAAAAAGAGTATGTTGAGGTTCCAAGAGTCTACTCAGATGACTTCACAAGTGGTGAAAGCTATTCAGTTGAAGACAATGGAGATATTATATCTGAGAGTTGCCCATGA 2130 0.4019 MQMVETFYMYLFLLLLVFFETCHAACVPSSCGSIHNIRYPFRLDDDPEDCGIFSYTLSCKNNLTVLYLNSIKYCVKEIDYSKYIIRVVDSNIEENSYSFLPRYSLAAFNFTSDSNNYQYRYDQTRSYLSNASYWLPIIHEKTYQLSKLVTYLSTESTINSSSRYVEIGGCVNDDYSSWHAKSENNKRRLYISVGGNYLRDLRLVDEYRVEMIYMTSWPGAFKDHISTSCSDIRKGLEYGVELSWLEGVCGGGDERIKNRYKLPPLVESDNVCSLASPYIPGPFDYFRGLVVGLYELHHGKDLLTSSVSGFTETAQYYLGRFTARFVLPLYLIFRIVSGVSFVIGIFITVFSRRHLSTYENIEAFLQDNRHSLMPIRYSYSEIVNMTRGFDDKLGQGGFGSVYKGKLRSGLHAAIKMLEKSNTNGQDFISEVATIGRIHHVNVVRLFGYCVEGSKRALVYEFMPSGSLDRYIFRKEESTTLTCDQVYQISLGVARGITYLHEGCDMQILHFDIKPYNILLDENFVPKISDFGLAKLYPINDSIIVLTAARGTIGYMAPELFYKNIGAVSFKADVYSFGMLLMEMAHRQKNVNSHAENSSQVFFPTWIYDQFYKGEDIELDDSTEEENKVIKKMIIVALWCIQLKPCDRPSMKKVVEMLEGELDILEMPPKPLLYPEKEYVEVPRVYSDDFTSGESYSVEDNGDIISESCP 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2046 709 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 688 IPR045874 GO:0004672
Aed9g2046 709 SUPERFAMILY Protein kinase-like (PK-like) 369 658 IPR011009 -
Aed9g2046 709 Pfam Protein kinase domain 391 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2046 709 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 10 688 - -
Aed9g2046 709 Gene3D Transferase(Phosphotransferase) domain 1 462 665 - -
Aed9g2046 709 Gene3D Phosphorylase Kinase; domain 1 361 461 - -
Aed9g2046 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Aed9g2046 709 ProSiteProfiles Protein kinase domain profile. 387 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2046 709 SMART serkin_6 387 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2046 709 ProSitePatterns Protein kinases ATP-binding region signature. 393 415 IPR017441 GO:0005524
Aed9g2046 709 Pfam Wall-associated receptor kinase galacturonan-binding 26 89 IPR025287 GO:0030247
Aed9g2046 709 CDD STKc_IRAK 393 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2046 Aed-Chr9 23724437 23727372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2046 333 691 Receptor kinase-like Gene Family AT5G38280 47.541 8.94e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aed9g2046 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2046 - - qsu:112031199 638.262