Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2043 ATGAGGACCCGTTTTCCCTCCACTCGGGTCATTCTCGTGGCCTCGCTCTGTTTTCTCGCAAGCTTCGAATTATTGGAAGCCAAAACCATCGACCCCTACAAGGTTCTTGGGGTTGATAAAAATGCGGGTCAGCGGGAAATTCAGAAGGCGTTTCACAAGCTATCTCTCAAGTATCACCCTGACAAGAACAAAGCCAAGGGTGCACAAGAGAAGTTTTCTCAGATCAATAATGCATATGAGATTTTATCAGATGAAGAGAAGAGAAAGAATTATGACATGTATGGAGATGAGAAAGGAAATCCAGGATTTCAAGGTGGCCATCCTGGAGGTCCGGGTGGATATTCCTATTTTTCAGGGGGTGGTCCTGGACAAAGCCATTTTAACTTCAAACCAGGGGGGGACTGGCAGGGTATGGGTGGTCAGGGAGGATCTAACTCATACTCCTTTTCCTTTGGTGGCTCGGGCGATTCCAATCCTTTTGGATTTGGCTTGGATGATATTTTTGGCAGTGTTTTTGGTGGTGGAGGTGGTTGGAGTCAGTTTGGTGGCTTTGGCAGTTCAGCCAAGTCTCAATCTGGGTCCAAGAGTTCCGCCAAAAGTCTTAGAGCTATAAGTTCACAGATTTACAAGAAAGAAATAGAAAATGCAGGGATGACTTGGCTTTTGTTATCTTATGTACCCTCATCAAAGGAGATCCAATACTTTGAATCCACTATAGAGGAGGCTGCCAGTTCATTGCAGGGAGCTTTGAAGGCTGGAATCCTTAATTGTGAAAAGGAAGTCTCACTCTGTAAGGAGCTTGGTATATATCCACGAAGAGCTCCAAGGCTTTTTGTTTATTCTTACAAGGAGAATGAAAAAGGTTCCTTCGTGGAGTTTAGTGGAGACTTGGCTGCTAAGAATTTGAAGGCTTTCTGTCAAGAACACTTGCCAAGGTTTTCAAAACGGACCAACTTGAATCATCTTGATCAATTCGGCACTACTGGAAAGTTTCCTAGGGTGCTGCTTCTCTCCACGAAGAAGGACACTCCTGTAATTTGGCGTGTCCTTAGTGGATTGTATCACAAACGCATTACTTTCAGTGATGCAGAGGTTCATGATGTTTCTGATCTAAGAGTGAAAACTCTAGGAGTTGATACACTTCCAGCTATTGTAGGCTGGCTACCTAATGGTGAAAAGCGTGTTCTGAAAACTGGGATTTCTGTGAAAGATTTAAAATCTGCAGTTCTTGATCTTAGTAACATACTTGATAGTTTTGAGAAAGTAAGTAAAAAGGAATCATCTGGTCAATCCAAGCAGGCACAAACTGATTCAGACGAGGGACACATACCTTTACTTTCCAAGTCAAACTTTGATGCTCTATGCGGTGAGAAAACTCCAGTCTGCATAATTGGTGCCTTCAGATCTTCTAAAGCTAGAGAAAAGCTAGAATCAATCCTCTCGTTGGTCTCTCAAAAATCATTGTCAAGACAACCAAATCAGGGATCCAGCAGCTCTAAGGACTCCATTTCCTATGCTCTCTTAGACGCTGCAAAGCAACAGTCATTTCTAAAGGCATTTGACAAAACAGGTTATAAATCATCAAAAAGTTTGTTGATTGCCTACAAACCTCGTAGAGGGAAGTATAGTGTATTTATGGGTGAAATGACAATAGAGGAGATAGAGAATTTCATTGGCTCCGTTCTCAGTGGAGATGTACCCTTCAGAGAAACAACACGTGGGAAGCCTGTACTAGAGCAGTATTAG 1746 0.4278 MRTRFPSTRVILVASLCFLASFELLEAKTIDPYKVLGVDKNAGQREIQKAFHKLSLKYHPDKNKAKGAQEKFSQINNAYEILSDEEKRKNYDMYGDEKGNPGFQGGHPGGPGGYSYFSGGGPGQSHFNFKPGGDWQGMGGQGGSNSYSFSFGGSGDSNPFGFGLDDIFGSVFGGGGGWSQFGGFGSSAKSQSGSKSSAKSLRAISSQIYKKEIENAGMTWLLLSYVPSSKEIQYFESTIEEAASSLQGALKAGILNCEKEVSLCKELGIYPRRAPRLFVYSYKENEKGSFVEFSGDLAAKNLKAFCQEHLPRFSKRTNLNHLDQFGTTGKFPRVLLLSTKKDTPVIWRVLSGLYHKRITFSDAEVHDVSDLRVKTLGVDTLPAIVGWLPNGEKRVLKTGISVKDLKSAVLDLSNILDSFEKVSKKESSGQSKQAQTDSDEGHIPLLSKSNFDALCGEKTPVCIIGAFRSSKAREKLESILSLVSQKSLSRQPNQGSSSSKDSISYALLDAAKQQSFLKAFDKTGYKSSKSLLIAYKPRRGKYSVFMGEMTIEEIENFIGSVLSGDVPFRETTRGKPVLEQY 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2043 581 Coils Coil 65 85 - -
Aed9g2043 581 Gene3D DnaJ domain 28 182 IPR036869 -
Aed9g2043 581 CDD DnaJ 31 84 IPR001623 -
Aed9g2043 581 SMART dnaj_3 30 87 IPR001623 -
Aed9g2043 581 MobiDBLite consensus disorder prediction 94 117 - -
Aed9g2043 581 PANTHER DNAJ PROTEIN ERDJ3A 7 578 - -
Aed9g2043 581 SUPERFAMILY Thioredoxin-like 207 311 IPR036249 -
Aed9g2043 581 PANTHER DNAJ PROTEIN ERDJ3A 7 578 - -
Aed9g2043 581 PRINTS DnaJ domain signature 67 87 IPR001623 -
Aed9g2043 581 PRINTS DnaJ domain signature 33 51 IPR001623 -
Aed9g2043 581 PRINTS DnaJ domain signature 51 66 IPR001623 -
Aed9g2043 581 PRINTS DnaJ domain signature 87 106 IPR001623 -
Aed9g2043 581 Pfam DnaJ domain 31 92 IPR001623 -
Aed9g2043 581 ProSiteProfiles dnaJ domain profile. 31 95 IPR001623 -
Aed9g2043 581 SUPERFAMILY Thioredoxin-like 441 567 IPR036249 -
Aed9g2043 581 SUPERFAMILY Chaperone J-domain 27 124 IPR036869 -
Aed9g2043 581 ProSitePatterns Nt-dnaJ domain signature. 72 91 IPR018253 -
Aed9g2043 581 Gene3D Glutaredoxin 201 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2043 Aed-Chr9 23716331 23719990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2043 33 94 C2H2 Transcription Factor Family AT1G74250 39.706 4.63e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2043 - - gmx:100785691 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2043 9 23716331 23719990 Aed9g2043 9 23716331 23719990 ECH