Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2026 ACTCTGAATGTTACAATTGCTCCTTTTTCGATTCGTAGGTCAAGCAAACTGCTCATAGAGGATTATGTAATTGATCTTGACAGTGTTACGAAGGAAAGGATGTATGTTGGTTTCTCAGCATCAACGGGGGCGCATGAATCAAGCTCTCACTATCTTCTAGGATGGAGTTTTGCAGTGAACGGTTCTGCCCCTCAGCTGAATGTTTCTAATCTTCCAAAGCTGCCTCCCAAGGAGAAGGATCCAACCTCATTTCCTTGGATCAACGTTGCCATAGGGGTGTTGTCTGCTTTCACTTTTTGCCTCTTGTTTAGGTACAAAGATCTTCACTTGGCAACAAAGGGGTTTGTGGAGAGCCAGCTGGTTGGAGTTGGAGGCTTTGGTGCTGTGTACAAAGGTGTGTTGCCTAATTCCACAGGTGCTGAGGTTGCTGTCAAGAGGATTGTGAGGAGTCCTTATCATGGAATGAGGGAGTTTGCAGCTGAGATTGAAAGCTTGGGAAGGTTGAGGCACAAGAATTTGATTAACCTTCCAGGGTGGTGCAAGAAAAAGAATGATCTACTCTTAATCTATGATTTCATTCAAAATGGAAGTTCTGTCCTACATAACAACAACTTTGTTTTGAATTGGAAGCAAAGATTCAACATTTGCAAAGGCATCAGTGCTGGACTATTGTACCTGCATGAGGAGTGGGAGCAAGTGGTGATTCATAGAGACGTGAAAACTAGTAACGTTTTGATAGATGCAGATTTGAATGCACGCTTAGGTGACTTTGGACTTGCAAGGCTATACAACCATGGTCAAGTGTCACACACAACCAGGGTGGTTGGTACTATTGGCTACATTGCACCGGAGCTAACTCGCACGGGGAAGGCTACCTCAAGCACGGATTTGTATGCATTTGGTGTTGTGCTACTTGAATTGGCCACAGGAAAGAGGCCTCTTGATTCGGTTCAGTTTTTCTTAGTAGAGTGGGTTGTTGAGAGTTACTATTTAAGTCAAATTCTTGAGGTGGTTGATCCTAAGCTTAATTCAGTTTATGATGAGGAAGAAGTTGAGTTGGTACTAAACTTTGATGACCCTCTTCCTAATATTGCTGATTGGGGACATGGTGTGTCTACTAGGAGCATTAGATTGAGCTCAGGTTTCTTAGAAGTCACGTCACCTAGGCCAATTGTTGTAACATCGGGATATTTGTCTTCCATTAGCATGGGCACCAACTCCATAGAGGCTGGTAGATAG 1239 0.4358 TLNVTIAPFSIRRSSKLLIEDYVIDLDSVTKERMYVGFSASTGAHESSSHYLLGWSFAVNGSAPQLNVSNLPKLPPKEKDPTSFPWINVAIGVLSAFTFCLLFRYKDLHLATKGFVESQLVGVGGFGAVYKGVLPNSTGAEVAVKRIVRSPYHGMREFAAEIESLGRLRHKNLINLPGWCKKKNDLLLIYDFIQNGSSVLHNNNFVLNWKQRFNICKGISAGLLYLHEEWEQVVIHRDVKTSNVLIDADLNARLGDFGLARLYNHGQVSHTTRVVGTIGYIAPELTRTGKATSSTDLYAFGVVLLELATGKRPLDSVQFFLVEWVVESYYLSQILEVVDPKLNSVYDEEEVELVLNFDDPLPNIADWGHGVSTRSIRLSSGFLEVTSPRPIVVTSGYLSSISMGTNSIEAGR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2026 412 SUPERFAMILY Protein kinase-like (PK-like) 96 344 IPR011009 -
Aed9g2026 412 Gene3D - 1 68 - -
Aed9g2026 412 Pfam Legume lectin domain 1 72 IPR001220 GO:0030246
Aed9g2026 412 Gene3D Phosphorylase Kinase; domain 1 93 192 - -
Aed9g2026 412 PANTHER - 1 102 - -
Aed9g2026 412 PANTHER - 103 356 - -
Aed9g2026 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Aed9g2026 412 Gene3D Transferase(Phosphotransferase) domain 1 196 358 - -
Aed9g2026 412 SMART serkin_6 115 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2026 412 ProSitePatterns Protein kinases ATP-binding region signature. 121 145 IPR017441 GO:0005524
Aed9g2026 412 ProSiteProfiles Protein kinase domain profile. 115 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2026 412 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 1 102 - -
Aed9g2026 412 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 103 356 - -
Aed9g2026 412 Pfam Protein kinase domain 116 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2026 412 SUPERFAMILY Concanavalin A-like lectins/glucanases 1 137 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2026 Aed-Chr9 23538558 23539952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2026 2 357 Receptor kinase-like Gene Family AT3G53810 50.127 5.33e-119 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed9g2026 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2026 - - gmx:100791358 636.721