Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2019 ATGGGAAACTGCTGCAGATCTCCGGCCGCCGTGGCCCGGGAGGACGTGAAATCGAGCTTCTCCAACGCCGACCACGGAAAGCGCGGAGGAGGCGCCGGAGCCGCCTCCGCCGCGAAGCAGAAGGCGCCGATCACGGTGCTCGCCGGCGTGCCGAAGGAGAACATCGAGGACCGGTACCTGGTGGACCGCGAGCTCGGTCGCGGCGAGTTCGGCGTGACGTACCTCTGCATCGACCGCGACACGCGCGAGCTGCTCGCGTGCAAGAGCATCTCGAAGAGGAAGCTCAGAACCGCTGTGGACATCGAGGACGTGCGCCGCGAAGTCGCCATCATGCGCCACCTGCCGGAGAGTCCGAGCATCGTGTCACTCCGGGAGGCCTGCGAGGACGACAATGCCGTCCACCTCGTCATGGAGCTCTGCGAGGGAGGCGAGCTCTTCGACCGGATCGTCGCCCGCGGTCACTACACCGAGCGCGCCGCCGCAGCTGTGACGCGGACGATCGTCGAGGTCGTGCAGCTCTGCCACAAGCACGGCGTCATCCACCGCGACCTGAAGCCGGAAAACTTCTTGTTCGCGAACAAGAAGGAGAATTCGCCGCTCAAGGCTATTGACTTTGGCCTCTCCATATTCTTCAAGCCAGGTACGGAGCTCTCGCTCTAA 660 0.6455 MGNCCRSPAAVAREDVKSSFSNADHGKRGGGAGAASAAKQKAPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIEDVRREVAIMRHLPESPSIVSLREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGTELSL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2019 219 Gene3D Phosphorylase Kinase; domain 1 60 144 - -
Aed9g2019 219 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Aed9g2019 219 SUPERFAMILY Protein kinase-like (PK-like) 57 214 IPR011009 -
Aed9g2019 219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Aed9g2019 219 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 218 - -
Aed9g2019 219 Pfam Protein kinase domain 61 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2019 219 Gene3D Transferase(Phosphotransferase) domain 1 145 218 - -
Aed9g2019 219 SMART serkin_6 59 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2019 219 MobiDBLite consensus disorder prediction 16 36 - -
Aed9g2019 219 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13-RELATED 6 218 - -
Aed9g2019 219 ProSiteProfiles Protein kinase domain profile. 59 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2019 Aed-Chr9 23481612 23488808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2019 1 218 EF-hand Containing Proteins AT3G51850 83.028 3.81e-133 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed9g2019 Pkinase 3.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2019 K13412 - gmx:100783922 414.075