Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2017 ATGGGTCCCAATCGTTCATCACGTGGCTCTGCCACTGCCAAAGAACGCCTACGCTGGACACAAGAACTCCATGATCGTTTTGTGGAGTCTGTAAATAGACTTGGAGGCCCTGATAGGGCAACACCAAAAGGTATATTGAAAGGAATGAAGGGTATGGGTGTTTCAGAATTAAACATTTATCACGTCAAAAGCCACTTGCAGAAATACAGGAACTGTAAATTGATTCCAGAGTCCCCCACGAGGGGAAAGCTTGAGAAGAGAAGCATATCAGATATATTACCAAATTTTAGTTCTATATGTGCTCTTCAACTAAAGGAAGTCCTTCAATTGCAGACAGAGATGCAAAATTGTTTGACTGATAAAACAGAGGTTCAGAGAAGTTTGAAGCTAAAAATTGAAGCACAAGGAAAGTACTTTGAGAGAATTGGACAAAGTAATCATAGCAAAACAGTCATTGGAAAAGCATGCAAGCCTTATGCTTCAACAATTGCATCTCTGCCTTCACTTTCTGAGGAATCTGAATCTTTGAAAACACAGCCTGAGGAAGAGCATCATCAATCAACAAAAAAGAAAAGGATTTCTTCAGAAAAGGGTGTTGTTTTTCCAACAAGTTTTGAGCATGATGCATCAGAATTCTACAACCAAACCTGGAATTTTTCTTGGAGTCAGCTTGCAGCAGCATGCCAATCACCTTTGGTGCCCAGTTTCTTATTATGA 717 0.4003 MGPNRSSRGSATAKERLRWTQELHDRFVESVNRLGGPDRATPKGILKGMKGMGVSELNIYHVKSHLQKYRNCKLIPESPTRGKLEKRSISDILPNFSSICALQLKEVLQLQTEMQNCLTDKTEVQRSLKLKIEAQGKYFERIGQSNHSKTVIGKACKPYASTIASLPSLSEESESLKTQPEEEHHQSTKKKRISSEKGVVFPTSFEHDASEFYNQTWNFSWSQLAAACQSPLVPSFLL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2017 238 MobiDBLite consensus disorder prediction 175 195 - -
Aed9g2017 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 74 IPR017930 -
Aed9g2017 238 Pfam MYB-CC type transfactor, LHEQLE motif 103 142 IPR025756 -
Aed9g2017 238 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 8 196 - -
Aed9g2017 238 MobiDBLite consensus disorder prediction 170 195 - -
Aed9g2017 238 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 71 IPR006447 GO:0003677
Aed9g2017 238 SUPERFAMILY Homeodomain-like 13 71 IPR009057 -
Aed9g2017 238 Gene3D - 13 74 - -
Aed9g2017 238 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 8 196 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2017 Aed-Chr9 23439586 23442490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2017 6 155 G2-like Transcription Factor Family AT4G28610 46.154 1.68e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed9g2017 Myb_CC_LHEQLE 5.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2017 - - pvu:PHAVU_008G103100g 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2017 9 23439586 23442490 Aed9g2017 9 23439586 23442490 ECH