Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2015 ATGGGCGTGGACTTCTATAAGATTCTTCAGGTAGATAGAAGCGCCAAAGATGACGATCTCAAGAAAGCATATCGAAGGCTAGCCATGAAGTGGCACCCTGATAAGAACCCTAACAACAAGAAAGAGGCCGAAGCTAAATTCAAGCAAATCTCCGAAGCTTATGATGTTTTGAGTGATCCACAGAAGCGAGCAGTGTATGATCAGTATGGTGAGGAGGGGTTGAATGGTGTGCCACCAGGCGCGGGTGGTTTTCCTGGTGGTGGTGGTGGCGGTGGTGACAGTGGACCGACGGCATTCCGGTTTAACCCCAGAAGTGCAGATGATATATTTTCCGAGTTTTTCGGGTTTACAAGTCCCTTCGGTGGTGGAATGGGGGACATGGGTGGCCGGGCTGGTGGCTCTGGATTTCCCAGGGGTGGCCCATTTGGTGAAGATATTTTTGCTCAATTTAGGAGTTCAGCTGGGGAGGGCTCTGGCCATATGCCACCAAGAAAAGGTGCACCCATTGAGAGAACATTGCCTTGTAGTTTGGAGGATTTGAGACCCTCCACAGTAGAGGAAATCCTTACAATTGAGATCAAGCCAGGTTGGAAGAAAGGAACGAAAATAACTTTTCCCGAAAAGGGAAATGAGCAGAGAGGAGTTATCCCTGCAGACCTTGTCTTTATCATTGACGAGAAGCCCCACAGCCTCTTTAAGAGGGATGGCAACGATCTCGTTGTCACCCAGAAGATATCGCTCGTAGAAGCCTTGACCGGTTATACGGTGCAGCTGACAACCCTTGATGGCCGGAATCTTACGATCCCCATCAACTCCACCATTAGTCCGTCGTATGAAGAAGTTGTCAAAGGAGAGGGCATGCCCATTCCAAAAGAACCTTCCAAGAAGGGGAACTTGAGAATCAAGTTCAATATCAAGTTTCCGTCCAGGCTTACATCCGAACAGAAAAGTGGCATCAAGCGATTATTGACATCTCCGTAA 981 0.4852 MGVDFYKILQVDRSAKDDDLKKAYRRLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLNGVPPGAGGFPGGGGGGGDSGPTAFRFNPRSADDIFSEFFGFTSPFGGGMGDMGGRAGGSGFPRGGPFGEDIFAQFRSSAGEGSGHMPPRKGAPIERTLPCSLEDLRPSTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRNLTIPINSTISPSYEEVVKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKSGIKRLLTSP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2015 326 CDD DnaJ_C 167 311 - -
Aed9g2015 326 PRINTS DnaJ domain signature 6 24 IPR001623 -
Aed9g2015 326 PRINTS DnaJ domain signature 62 81 IPR001623 -
Aed9g2015 326 PRINTS DnaJ domain signature 24 39 IPR001623 -
Aed9g2015 326 PRINTS DnaJ domain signature 42 62 IPR001623 -
Aed9g2015 326 SUPERFAMILY HSP40/DnaJ peptide-binding domain 232 317 IPR008971 GO:0006457|GO:0051082
Aed9g2015 326 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 181 324 - -
Aed9g2015 326 Gene3D DnaJ domain 3 124 IPR036869 -
Aed9g2015 326 SUPERFAMILY HSP40/DnaJ peptide-binding domain 163 234 IPR008971 GO:0006457|GO:0051082
Aed9g2015 326 CDD DnaJ 4 59 IPR001623 -
Aed9g2015 326 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 180 - -
Aed9g2015 326 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 180 - -
Aed9g2015 326 Pfam DnaJ domain 4 67 IPR001623 -
Aed9g2015 326 Gene3D - 229 309 - -
Aed9g2015 326 Pfam DnaJ C terminal domain 183 308 IPR002939 -
Aed9g2015 326 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 181 324 - -
Aed9g2015 326 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Aed9g2015 326 MobiDBLite consensus disorder prediction 79 98 - -
Aed9g2015 326 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Aed9g2015 326 Gene3D - 159 228 - -
Aed9g2015 326 SMART dnaj_3 3 62 IPR001623 -
Aed9g2015 326 SUPERFAMILY Chaperone J-domain 3 125 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2015 Aed-Chr9 23421842 23427123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2015 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 9.00e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2015 K09510 - gmx:100781592 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2015 9 23421842 23427123 Aed9g2015 9 23421842 23427123 ECH
Aed9g2015 9 23421842 23427123 Aed2g1135 2 9390595 9395444 PCT