Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2003 ATGAACATATCTAAAATATCCAAATCAAACAGATACAGTCTCCATAAATTGGCATCAACCATAACTTTTCTTTCAGAGCAAAAGTCAGAGGAACCATCCATGGCTATGGCAAATGGGAACGGCTCATTGAAGTTGAATTCAAGTGACACCAAGGGAAAGACCATCACTTGCAAAGCTGCGGTGGCATATGGTCCTGGAGAGGCCTTGGTGGTGGAAAACATTCATGTTCATCCTCCTCAGAAAATGGAATACGAAGCTCAGCGTGCTTATCCTCGGATTCTGGGCCATGAAGCATCTGGGATTGTGGAGAGTGTGGGAGAAGGAGTGAGTGAAGTGAAGGAAGGGGACATAGTGTTGCCAATATTCAACGGGGAGTGTGGGGAGTGTTCGTTGTGCAAGTGTGAGAAGACGAACAAGTGCGAGAGGTTTGGGGTGAACGAAATGAAGAAGGTGATGGAAAGTGACGGCAAAACCAGGTTCTCCACTCTTGATGGCAAACCCATCTTCCATTTTTTGAACACTTCAACTTTCTCGGAGTACACGGTGGTTGATTCGGCTTGTGTGGTGAAGCCTGTTCACACTGATGAACACACTCTCAGCATCAAAAACCTCACCTTGCTCAGCTGCGGCGTCGCCACAGGGGTTGGAGCTGCTTGGAATACAGCTAATGTGCATTCTGGTTCAACTGTTGCTGTTTTTGGTCTTGGTGCTGTTGGCCTCGCTGTTGCTGAAGGGGCAAGAGCTAGAGGTGCATCCAAAATAATAGGTGTGGACATCAACCCTGACAAATTCATCAAAGCCCAAGCTATGGGAGTGACAGACTTCATAGACCCTAAGGATGAAGAGAAGCCAGTATACGAGAGAATTAGAGAATTGACTGATGGAGGTGTACACTACAGTTTTGAATGTACTGGAAATGGGGATGTTCTTAGAGATGCCTTCTTGTGTGCTCACGAGGGTTGGGGATTGACTGTAATCTTGGGAATTCATGCATCACCAAGGTTGCTTCCCATCCACCCAATGGAGCTCTTCGATGGTCGCAAGATTGTAGGATCAGTATTTGGAGATTTCAAAGGGAAAAGTCAATTGCCTCACTTTGCCAAACAATGTGGACATGGAGTGGTGAAGCTGGACAATTTCATCACTCACGAGCTACCCTTTGAGGAGATAGACAAAGCCTTCGATCTTTTGATCACTGGGAAGTCACTGAGATGTCTTCTGCACTTCTAA 1230 0.4626 MNISKISKSNRYSLHKLASTITFLSEQKSEEPSMAMANGNGSLKLNSSDTKGKTITCKAAVAYGPGEALVVENIHVHPPQKMEYEAQRAYPRILGHEASGIVESVGEGVSEVKEGDIVLPIFNGECGECSLCKCEKTNKCERFGVNEMKKVMESDGKTRFSTLDGKPIFHFLNTSTFSEYTVVDSACVVKPVHTDEHTLSIKNLTLLSCGVATGVGAAWNTANVHSGSTVAVFGLGAVGLAVAEGARARGASKIIGVDINPDKFIKAQAMGVTDFIDPKDEEKPVYERIRELTDGGVHYSFECTGNGDVLRDAFLCAHEGWGLTVILGIHASPRLLPIHPMELFDGRKIVGSVFGDFKGKSQLPHFAKQCGHGVVKLDNFITHELPFEEIDKAFDLLITGKSLRCLLHF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2003 409 Pfam Alcohol dehydrogenase GroES-like domain 85 187 IPR013154 -
Aed9g2003 409 Gene3D - 214 352 - -
Aed9g2003 409 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 95 109 IPR002328 GO:0008270|GO:0016491
Aed9g2003 409 SUPERFAMILY GroES-like 50 191 IPR011032 -
Aed9g2003 409 PANTHER ALCOHOL DEHYDROGENASE 50 84 - -
Aed9g2003 409 SUPERFAMILY GroES-like 358 409 IPR011032 -
Aed9g2003 409 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 200 369 IPR036291 -
Aed9g2003 409 Pfam Zinc-binding dehydrogenase 237 356 IPR013149 -
Aed9g2003 409 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 85 408 - -
Aed9g2003 409 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 50 84 - -
Aed9g2003 409 Gene3D - 87 405 - -
Aed9g2003 409 PANTHER ALCOHOL DEHYDROGENASE 85 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2003 Aed-Chr9 23338297 23345165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2003 90 398 Monolignol Biosynthesis Gene Families AT2G21890 26.462 1.77e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2003 K00001 - gmx:100815166 619.772