Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1999 GGAAAACTGCTTCAATGGGTTGTTCCAGTAGGCCCATATAGAAACAAAAACTCCGAACTCTCTGTTAACTCATTGTACCATTTGGTTTTGGTTAATAAAACAAGTCTCTCTCTCTCCTTCGTTGCCCGAAGTGCACCTAAACATATGGGAACAAGCAGTTTTCTATGGAACTGTACTAAAAAATTTGTCACAGCTGCGGTAATTACTGTGACTGTGTCTGATCGTTTTGTGACCGTTGTTCCAGTTCGAGGTGGTTCTATGTCTCCCACATTTAATCCTAAAACCGGATCTTTTGATGACTATGTTTTGGTTGAGAAATTTTGCCTTGGGAGCTACAAGTTTTCACATGGCAATGTGGTGGTCTACCGCTCCCCACTGAATCACAAGGAGACACACATAAAGAGAATAGCTGCATTACCTGGTGAATGGTATGGCACTCATCATAACAATGATGTGATTCAGATTCCATTAGGACATTGTTGGGTTGAGGGGGACAATGCAGCTTCTAGCATGGATTCAAAGTCATATGGACCAATTCCTTTGGCCCTAATTCGGGGAAGGGTTACGCATGTTGTGTGGCCTCCTCAAAGAATAGGAGCTATCAAGAGTATGGCACCACAATGA 624 0.4279 GKLLQWVVPVGPYRNKNSELSVNSLYHLVLVNKTSLSLSFVARSAPKHMGTSSFLWNCTKKFVTAAVITVTVSDRFVTVVPVRGGSMSPTFNPKTGSFDDYVLVEKFCLGSYKFSHGNVVVYRSPLNHKETHIKRIAALPGEWYGTHHNNDVIQIPLGHCWVEGDNAASSMDSKSYGPIPLALIRGRVTHVVWPPQRIGAIKSMAPQ 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1999 207 CDD S26_SPase_I 79 188 IPR019533 GO:0004252|GO:0006465
Aed9g1999 207 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 49 206 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Aed9g1999 207 SUPERFAMILY LexA/Signal peptidase 77 201 IPR036286 -
Aed9g1999 207 PRINTS Bacterial leader peptidase 1 (S26A) family signature 155 174 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aed9g1999 207 PRINTS Bacterial leader peptidase 1 (S26A) family signature 75 91 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aed9g1999 207 PRINTS Bacterial leader peptidase 1 (S26A) family signature 132 144 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aed9g1999 207 Pfam Signal peptidase, peptidase S26 57 142 IPR019533 GO:0004252|GO:0006465
Aed9g1999 207 Pfam Signal peptidase, peptidase S26 151 193 IPR019533 GO:0004252|GO:0006465
Aed9g1999 207 Gene3D Umud Fragment, subunit A 72 204 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1999 87 201 MADS-box Gene Family AT1G29960 34.711 6.28e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1999 K09648 - gmx:100527429 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1999 9 23312377 23314809 Aed9g1999 9 23312377 23314809 ECH