Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1994 ATGTTTTGCAATTGTTTTGGTGCTTTGAATTGGTGTGGAACGAGGGATGATCCTGCAGACCAGCCACATGAACAAGGTGAGAACATAGAGACAATTTTGTATAAAATTGTTGCAGTGGTTGCAACTAAAAAGTTTAGCTATAACTCGTTAAGATCAGCAACAGGAGATTTTCATCCTTCAAGCAAAATCGGTGGAGGAGGTTATGGAGTTGTCCACAAGGGAGTATTAAGGGATGGTACTCAAGCTGCTATCAAGTCTCTTTCTGTAGAGTCTAAACAGGGAACCCATGAATTCATGACAGAGATTGATATGATATCAAATATACGACATCCAAATCTTGTGGAACTGATTGGCTGCTGTGTTGAGGGTACTCACCGAATATTGGTTTATGAATTTATGGAGAACAATAGCCTTTCAAGCTCTTTGCTTGTTTCTGAACAGAGAATATTCTCTATAGGAGACTTTTGTCTGGGACAACAATTGTATTACTGTGTTGTGGGATATCTTGCACCAGAATATGCACTTCTGGGACAACTTACAAAGAAGGCAGACGTGTACAGTTTTGGGATTCTCATGCTTGAAATAATCAGTGGGAAAAGCAGTAGCATAGCTGCATTTGAAGAGGATTATTTGGTTTTGGTGGAATGGGCTTGGAAACTGAAAGGCGAAAATAGGCTTCTGGACCTTGTTGATTCAGAACTAAATGAATATGATGAAAGTGAAGTGTATAGGTTCCTCATAGTGGCTCTATTTTGCACCCAATCAGCTGCTCAACATAGACCAAGCATGAAGCAAGTGTTGCAAATGCTTTCAAAGGAAGTTCACCTTAATGAGAAGGCATTGACTGAGCCTGGAATATACAGATGGCACAGCACTAGCAAGAAGGGTGGTTCTTTGAATGAGACATCATCATCTTCTCAAGCAATCAAGTACAAGAAAACTGAAAATGCACATGAAGCACCTTCAACTCACTTTAGTGGTACAGATATTGTGACAGAGATGCTTCCAAGATGA 1014 0.4004 MFCNCFGALNWCGTRDDPADQPHEQGENIETILYKIVAVVATKKFSYNSLRSATGDFHPSSKIGGGGYGVVHKGVLRDGTQAAIKSLSVESKQGTHEFMTEIDMISNIRHPNLVELIGCCVEGTHRILVYEFMENNSLSSSLLVSEQRIFSIGDFCLGQQLYYCVVGYLAPEYALLGQLTKKADVYSFGILMLEIISGKSSSIAAFEEDYLVLVEWAWKLKGENRLLDLVDSELNEYDESEVYRFLIVALFCTQSAAQHRPSMKQVLQMLSKEVHLNEKALTEPGIYRWHSTSKKGGSLNETSSSSQAIKYKKTENAHEAPSTHFSGTDIVTEMLPR 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1994 337 Gene3D Phosphorylase Kinase; domain 1 23 132 - -
Aed9g1994 337 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 166 318 - -
Aed9g1994 337 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 148 - -
Aed9g1994 337 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 148 - -
Aed9g1994 337 ProSiteProfiles Protein kinase domain profile. 57 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1994 337 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Aed9g1994 337 Gene3D Transferase(Phosphotransferase) domain 1 136 284 - -
Aed9g1994 337 Pfam Protein tyrosine and serine/threonine kinase 60 148 IPR001245 GO:0004672|GO:0006468
Aed9g1994 337 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 166 318 - -
Aed9g1994 337 MobiDBLite consensus disorder prediction 314 337 - -
Aed9g1994 337 SUPERFAMILY Protein kinase-like (PK-like) 42 288 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1994 Aed-Chr9 23232914 23242723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1994 45 285 Receptor kinase-like Gene Family AT1G56120 38.721 1.80e-61 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed9g1994 PK_Tyr_Ser-Thr 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1994 - - gmx:100816683 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1994 9 23232914 23242723 Aed9g1994 9 23232914 23242723 ECH