LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed9g1929	ATGTATATGTCTCCAGGCCAAGACATGAACATGTCTATGACGATGATGCAAATGAATTTCTACTGGGGCAAAGGTGCCATAGTGCTTTTCCCTAGGTGGCCTGGGAACAACGATGGCATGTACATCTTAGCTTTGGTTTTTGTGTTCTTCCTAGCCGTGGCTATTGAAGTGTTGTCTAACCAGCCACTTCTCAAACCTGGGACTAAGCCTGTTGCTGGAAGCCTCATTCAAGCTACTTTACTTTTGATGAGTTCTCGTGGTATTCCATTGATATGCAATGAAAGTCTTGCGAAAATTGGTCCTATCTATCCCAACAACTTTCTTTCCATTTAA	333	0.4264	MYMSPGQDMNMSMTMMQMNFYWGKGAIVLFPRWPGNNDGMYILALVFVFFLAVAIEVLSNQPLLKPGTKPVAGSLIQATLLLMSSRGIPLICNESLAKIGPIYPNNFLSI	110

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed9g1929	110	PANTHER	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	5	80	IPR007274	GO:0005375\|GO:0016021\|GO:0035434
	Aed9g1929	110	PANTHER	CTR FAMILY COPPER TRANSPORTER	5	80	-	-
	Aed9g1929	110	Pfam	Ctr copper transporter family	18	59	IPR007274	GO:0005375\|GO:0016021\|GO:0035434

Showing 1 to 3 of 3 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed9g1929	Aed-Chr9	22702982	22703737	Dispersed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed9g1929	20	72	Inorganic Solute Cotransporters	AT5G59030	52.830	1.57e-13	61.2

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed9g1929	K14686		-	gmx:100527849	107.457

Showing 1 to 1 of 1 entries