Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1911 ATGGCTGAGGAGGGTTTCGAGCATTACCATGTTCCACAACAAAGTAGAAGGGACAAGCTGAGAGTTTTCCCTCACAACCACCAACAACCTTGTTTCGTTGAGTCTTCTTCCTCCACCCTTCACCCCACTTGTCCAACTTTACCCTCTCTCTACGATCCTTCCCTTATTCCCTCCGATTTGTTAGCTTGTGCCACCCAACAAGGTGTTGCTAAGGAAGAAGGTTCCAATTTGATGATGGGGTTTGTAGAGGGTGATGCAATTCAAGTTATCAACAGTAATAACAACCACAATCACAACCACAACAACAACAACAACCCTTTTCTCTACCAGCTTCAGAACCTTAGGGAATTTGGTGAAACCTACAACGATGCTTCTCATGATATGATGGTGTTCAAGCCGGAGCCTTTGTCTTTGTCTTTGTCCTCCCACAGTAACAACAACAACAACACACATCATCATCACCCTTTGGAGCTGAATCTTCAGCGATATGGGACTGTTGTTATTCCGGGTTTGGTTGGAGGGAACAGTACTACTACTACTGAGGTTTCGAGAAATTCGGTTCCACTTGGACCCTTTACGGGATATGCTTCGATATTGAAGGGATCGAGGTTCTTGAAGCCAGCACAGCAATTATTGGAAGAGTTATGTGATGATGGGGTTCGTGGAAGTTACGCTACCGAGAAGATTATTGCTTCTCCTGATGCATCGTTGATGGAACCTCCTCATGAAGGTTTGATGAGTAGTGCTAGTGATGGAGATGATTCACTTGGTGAATATGGAAATGAAGGTAGGAAGAAGAAGTGTAGACTATTAACCATGCTTGACGAGATTTACAGGAGGTACAGGCAGTATTATCAACAGATGCAGGCAGTAATAACTTCATTTGAGTATGTTGCTGGCCTCGGTAATGCGGCCCCATATGCGAGTTTGGCTATAAATGCCATGTCAAAACACTTTCGATGCTTGAAGAATGCTATTACTGACCAGCTTCAGTTCATCAACAAGGCTCCTTTTCAGCACATAAGCAACAGAAAAGATGAATCTCCGAGGTTCCACAGCAGTACTGATAGAGGCACTCACAGCCAAAGGCCAGGGTTTCTTGAGCACCATCAACCGGTTTGGCGACCTCAACGAGGACTCCCCGAGCGTGCCGTGAGTGTTCTCCGAGCCTGGTTGTTTGAACACTTTCTGCACCCTTATCCTACTGATACTGACAAGATAATGTTGGCTAAACAAACCGGTCTATCTCGCAACCAGGTGTCTAATTGGTTTATTAATGCAAGAGTGAGGCTTTGGAAACCAATGGTGGAGGAGATACACATGCTAGAATCACAGCAAGGTCAAAAAAGGCCACAGAGGGAAGAACAAAGTAGGAGAAACTTAAGTGATCATTTACCTTCTTCAGAAAACTCTCTTGTTACTGAGAATCCATCCACCTCGATGGAGAAGTACTTTCATGCTGCCCCTTATAAACCCACAAGAAATGAACTTGCTAGTATGCAAGTGAGGAATCAGCAGGAACAACTGATGAATCAGACCAACACAAGCAATAATAATCAGCAACAAGTTGGTGTTGGAGTGAGCAACAACAATGGTGTGTCTCTCACACTTGGTCTTCATCAAAACCATCATGGTATTGGATTGTCTGAGCCCTTTGGAATTGGAATGACTGCAGCTCAACGTTTTGGTGTTGCCCTTCAGCCTGATCAGGGTTATGTTGTAAGTGGCTTTGAGTCACAAAATCGACATTTTGGTGCAAGAGATGTTATTGGAGGAGGGCAATTGTTGCATGATTTTGTAGGCTGA 1806 0.4435 MAEEGFEHYHVPQQSRRDKLRVFPHNHQQPCFVESSSSTLHPTCPTLPSLYDPSLIPSDLLACATQQGVAKEEGSNLMMGFVEGDAIQVINSNNNHNHNHNNNNNPFLYQLQNLREFGETYNDASHDMMVFKPEPLSLSLSSHSNNNNNTHHHHPLELNLQRYGTVVIPGLVGGNSTTTTEVSRNSVPLGPFTGYASILKGSRFLKPAQQLLEELCDDGVRGSYATEKIIASPDASLMEPPHEGLMSSASDGDDSLGEYGNEGRKKKCRLLTMLDEIYRRYRQYYQQMQAVITSFEYVAGLGNAAPYASLAINAMSKHFRCLKNAITDQLQFINKAPFQHISNRKDESPRFHSSTDRGTHSQRPGFLEHHQPVWRPQRGLPERAVSVLRAWLFEHFLHPYPTDTDKIMLAKQTGLSRNQVSNWFINARVRLWKPMVEEIHMLESQQGQKRPQREEQSRRNLSDHLPSSENSLVTENPSTSMEKYFHAAPYKPTRNELASMQVRNQQEQLMNQTNTSNNNQQQVGVGVSNNNGVSLTLGLHQNHHGIGLSEPFGIGMTAAQRFGVALQPDQGYVVSGFESQNRHFGARDVIGGGQLLHDFVG 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1911 601 MobiDBLite consensus disorder prediction 443 462 - -
Aed9g1911 601 Pfam Associated with HOX 198 327 IPR006563 -
Aed9g1911 601 MobiDBLite consensus disorder prediction 343 357 - -
Aed9g1911 601 Gene3D - 377 439 - -
Aed9g1911 601 SMART HOX_1 374 438 IPR001356 GO:0003677
Aed9g1911 601 CDD homeodomain 374 435 IPR001356 GO:0003677
Aed9g1911 601 Pfam Homeobox KN domain 391 430 IPR008422 GO:0003677|GO:0006355
Aed9g1911 601 ProSiteProfiles 'Homeobox' domain profile. 371 434 IPR001356 GO:0003677
Aed9g1911 601 SMART prehox3 193 328 IPR006563 -
Aed9g1911 601 MobiDBLite consensus disorder prediction 463 481 - -
Aed9g1911 601 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 95 570 - -
Aed9g1911 601 MobiDBLite consensus disorder prediction 343 369 - -
Aed9g1911 601 SUPERFAMILY Homeodomain-like 376 441 IPR009057 -
Aed9g1911 601 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 95 570 - -
Aed9g1911 601 MobiDBLite consensus disorder prediction 443 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1911 Aed-Chr9 22584160 22590867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1911 4 601 Homeobox Transcription Factor Family AT5G02030 44.025 9.09e-129 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aed9g1911 POX 2.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1911 - - gmx:100790713 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1911 9 22584160 22590867 Aed9g1911 9 22584160 22590867 ECH