Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1889 ATGAACTACTTTGATAGTATTGTGATGGAGAATGAGGATGAGTTGGAGATGGGAGGGAGTAATGGTAATAGTGTTAATGCAGTGGCGGCGATGAAGAGTAGTAGTAGCGGTTCTTCGCGGTGGAACCCTACAAAAGAGCAAATAAGCATGCTAGAGAATCTGTATAAGCAGGGAATAAAGACTCCGAGTGCTGAGGAGATACAGCAGATAACTGCTAGGCTTAGGGCGTATGGTCACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAATCACAAAGCAAGGCAGAGACAGAAGCAGAAGCAAGAAACCATCGCTTACTTCAATCGCTTTCTTCATACGCCCCCGACTCATCACCTTTTTTTCTCCACCACGCCAATTTCTCCAAATCCCATATGTGGCCCATATTCCATACCTCTGCAGGCACAGAGTGAAATTGGGTATTATCCCCCACATCAACATCCAAAGGTGCTTGTACCCGTAGGTTTTAGGAAGAGCCACTTTGAGAAAGTTGTGTCCACAGGCCCGCAAATGCAACACCAGAGAATCTCGGATTGCAGCAACTTGATAAGCTACAGTAACCAAGAAACGTTGGATCTTTTTCCTCTGCACCCAACTGGCATTTTGGAAGGAAAAACAACAACAACAACAGACCAGGTGTCTTCTCTGCCTAATACGCCTTCTCCTGATAGTGATACTATCAATCAAGATGATCATGATCATGAAGCTTCCCCACTAAACCAACCCTTCTTTGATTTTTTTACTACTTCTGGACAAAGTTCTTATAATTAA 792 0.4369 MNYFDSIVMENEDELEMGGSNGNSVNAVAAMKSSSSGSSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQETIAYFNRFLHTPPTHHLFFSTTPISPNPICGPYSIPLQAQSEIGYYPPHQHPKVLVPVGFRKSHFEKVVSTGPQMQHQRISDCSNLISYSNQETLDLFPLHPTGILEGKTTTTTDQVSSLPNTPSPDSDTINQDDHDHEASPLNQPFFDFFTTSGQSSYN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1889 263 CDD homeodomain 40 100 IPR001356 GO:0003677
Aed9g1889 263 MobiDBLite consensus disorder prediction 209 263 - -
Aed9g1889 263 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 27 259 IPR044555 GO:0003700|GO:0099402
Aed9g1889 263 SUPERFAMILY Homeodomain-like 34 105 IPR009057 -
Aed9g1889 263 Pfam Homeodomain 39 98 IPR001356 GO:0003677
Aed9g1889 263 Gene3D - 25 104 - -
Aed9g1889 263 MobiDBLite consensus disorder prediction 209 232 - -
Aed9g1889 263 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 27 259 - -
Aed9g1889 263 ProSiteProfiles 'Homeobox' domain profile. 34 99 IPR001356 GO:0003677
Aed9g1889 263 SMART HOX_1 36 103 IPR001356 GO:0003677
Aed9g1889 263 MobiDBLite consensus disorder prediction 249 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1889 Aed-Chr9 22427606 22428498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1889 23 261 Wox Gene Family AT5G59340 38.290 1.16e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aed9g1889 Homeodomain 5.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1889 - - gmx:100817714 333.183