Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1883 ATGGCCACCCTTTTGAAAAGTTTATCACTTTTGTTGTTCCTTTTGATCCCAGTTTCATGCCAAGTTGACCATCTTCTCTATTCTGGATTCAAGGATGTGGATGCCAGCAACATATCCTTGAATGGTGCGGCTGAAATACAGCACAATGGAATACTCAAGTTGACAAATGAAACCAGCAGGTTATTGGGTCATGCTTTTTACCCATCACCTTTCCAACTAAAGAACACCACAGATGGTAAAGTTTTCTCCTTTTCCACCTCTTTTGCTCTTGCTATTGTCCCTGAGTACCCCAAGCTAGGTGGCCATGGCATGGCTTTCACAATAGCAACTTCTAAGGATCTCAAGGCTCTACCTAGCCAGTACCTTGGTCTTCTCAATTCAAGTGATAATGGTAACTTCTCAAACCACATCTTTGCAGTTGAGTTTGACACTGTGCAAGACTTTGAGTTTGGGGACATTAATGACAACCATGTTGGAATAGACATCAATAGTATGAAGTCCAATGCTCCTGCCAATGTTAGTTTGGTTGGTCTCACTCTCAAAAGTGGGAAACCGATTCTAGCTTGGGTTGATTATGATTCTCAATTGAATCTTATAAGTGTTGCACTTTCTCCTAATTCATCCAAACCCAAAACTCCACTCTTGACCTTTAATGTGGATCTCTCACCTGTTTTTCATGATACTATGTATGTTGGGTTCTCTGCTTCAACTGGTTTGCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTTAAAATCAATGGTCCAGCACCACCCCTTGCTCTCTCTTCTCTCCCGCAGCTTCCTAAGCCAAAGAAGAAACAAACATCTTTGATAATTGGGGTTTCTGTCTCAGTTGCTATCGCCAGCATAGGCCGGCTTTGCCACCGGAATTTGGTTCAATTACTCGGCTGGTGTCGCCGCCGTGGTGACTTGTTGCTCGTGTATGACTTCATGGCTAATGGGAGCTTGGACAAGTACTTGTTTGATGAACCAAAGATCGTGGCTTGCGGGCGCAGGCCGATCGAGCCTAAGGCATTGCCAGAAGAGTTGGTGTTGGTGGATTGGGTGTGGGAGAAGTACAAACAAGGTAGAATACTTGATGTGGTGGATCCAAGATTAAATGGCCATTTTGGTGAGAAGGAGGTGTTGGTGGTGCTGGAATTGGGGTTGATGTGCTCAAATGATGTGCCTGCAGCTAGGCCTAGCATGAGGCAAGTGGTGAGGTATTTGGATGGGGAAAAAATTGAGGTGCCAGAGGACTTGAAAAAGCCAGGAGGTGTGAGTCATCACCAAGAGGGGTTTGATGAGTTCTTGTACTCACTTGCATCTTCTTCCTTTGATAAGATGAGTTCTGGCTCCAATTTTGGAAATAGAGACTTGGATTCTAATTTTCTTTCCTTTGCTAATTCACCTCATTCCCTTCTCCATGGTAAAGAGGAAAGGGAACTAGGGTCTCTCAGTCTCATCAACACTCAACAGAGGGAATTAACTATTTGTTTAGATATTGTTTTGTGTGTGCCAATTGTATTGACTGATATGATGTGTCTTGCATATAATTTGTGCTCAATTTAA 1575 0.4343 MATLLKSLSLLLFLLIPVSCQVDHLLYSGFKDVDASNISLNGAAEIQHNGILKLTNETSRLLGHAFYPSPFQLKNTTDGKVFSFSTSFALAIVPEYPKLGGHGMAFTIATSKDLKALPSQYLGLLNSSDNGNFSNHIFAVEFDTVQDFEFGDINDNHVGIDINSMKSNAPANVSLVGLTLKSGKPILAWVDYDSQLNLISVALSPNSSKPKTPLLTFNVDLSPVFHDTMYVGFSASTGLLASSHYILGWSFKINGPAPPLALSSLPQLPKPKKKQTSLIIGVSVSVAIASIGRLCHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPKIVACGRRPIEPKALPEELVLVDWVWEKYKQGRILDVVDPRLNGHFGEKEVLVVLELGLMCSNDVPAARPSMRQVVRYLDGEKIEVPEDLKKPGGVSHHQEGFDEFLYSLASSSFDKMSSGSNFGNRDLDSNFLSFANSPHSLLHGKEERELGSLSLINTQQRELTICLDIVLCVPIVLTDMMCLAYNLCSI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1883 524 Gene3D Transferase(Phosphotransferase) domain 1 336 423 - -
Aed9g1883 524 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 288 331 - -
Aed9g1883 524 PANTHER - 288 331 - -
Aed9g1883 524 CDD lectin_legume_LecRK_Arcelin_ConA 24 255 IPR001220 GO:0030246
Aed9g1883 524 Gene3D Transferase(Phosphotransferase) domain 1 283 335 - -
Aed9g1883 524 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 335 468 - -
Aed9g1883 524 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 6 286 - -
Aed9g1883 524 PANTHER - 335 468 - -
Aed9g1883 524 PANTHER - 6 286 - -
Aed9g1883 524 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 273 IPR013320 -
Aed9g1883 524 Pfam Legume lectin domain 26 265 IPR001220 GO:0030246
Aed9g1883 524 Gene3D - 24 254 - -
Aed9g1883 524 SUPERFAMILY Protein kinase-like (PK-like) 290 416 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1883 Aed-Chr9 22343410 22346232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1883 323 425 Receptor kinase-like Gene Family AT3G55550 56.731 7.47e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed9g1883 Lectin_legB 9.3e-78 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1883 - - gmx:100784346 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1883 9 22343410 22346232 Aed9g1883 9 22343410 22346232 ECH