Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1877 ATGAGAGCTTGTAGAGATTTATTAGAGTTTAGAGAATACAGATATGGATGGATATACATATATTCAGATATGGTCCATATGGAGGAGAAGGCACCTCCCCAAAAAAGACTCAAAGGCAAAGCAGGCGAGGGGTTGCAGGGTGTTGTGGACTTGAGCACGATGGATGGGTATGATGAACTTGTAGATGAATTGGAGAAGATGTTTGACATAATGGGGCAGCTTCAACATAGGAACAAGTGGGAACTTGTCTATGTTGATGATGAAGGAGATATGATTCTTGTTGGTGATGAACCATGGCTGTCAGTATCTCTTTATACTCAATAA 324 0.4074 MRACRDLLEFREYRYGWIYIYSDMVHMEEKAPPQKRLKGKAGEGLQGVVDLSTMDGYDELVDELEKMFDIMGQLQHRNKWELVYVDDEGDMILVGDEPWLSVSLYTQ 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1877 107 ProSiteProfiles PB1 domain profile. 34 107 IPR000270 GO:0005515
Aed9g1877 107 Gene3D - 39 105 - -
Aed9g1877 107 PANTHER AUXIN RESPONSE FACTOR 47 101 - -
Aed9g1877 107 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 47 101 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed9g1877 107 SUPERFAMILY CAD & PB1 domains 48 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1877 Aed-Chr9 22322628 22323733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1877 45 99 B3 DNA Binding Superfamily AT4G23980 58.333 5.77e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1877 K14486 - gmx:102665969 102.064