Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1876 ATGCCATCATCTGTGATTTCTAGTCAGAGCATGCATCTTGGAGTTCTTGCCACTGCATCTCATGCTGTAGCAACTCAGACTCTTTTTGTTGTATATTACAAGCCAAGGACAAACCAGTTCATTGTAAGTGTGAACAAGTATTTGGAGGCCATCAACCAAAAATGTAATGTTGGTATGAGATTCAGAACAAGGTTTGAAGGGGATGAATCCCCTGAAAATGACAAAAGATTTTCAGGCACAATAGTTGGAGTGGAGGATATTTCCCCTCACTGGGTAAACTCAAATTGGCGATCTCTTAAGGTTCAATGGGATGAAACTGCATCTTTTACAAAACCTGATAGAGTTTCACCATGGGACATAGAACCCATTGTGGCTTCTGTTCCTACTACATCATCTCAACCTGCTGTTATAAAGAATAAAAGGCCTCGACAAGCAAGTGAAGTTCCAGATATTGGAGACACACCATTAGCTGCTCCTACTTTCTGGGATGCTGGGATAACACAATCTGATATGACACAACTTACTGTCATGACCGAAAGCAAAAGGTGTGACACTAGTACCCATATGTGGCATCATAACAGCAAAAGCAGCAACAATGGTGTATCATCAATGAATCAGACAGAAGCAAGTTGGCTATCTTCCCCTTCTAAATTATATCACGACACAACCGATGACAACAAGAGCATCTCAGCTTGGCCTATTTCGAAACCTCACTCAGAAAGATTGAACAATGATCATTTCCTTGACCAGGTTGACAAGGAGATCAACAAAGTAGAGGCAGCTACAAGCTGTAGATTGTTCGGGATTGATCTTATTGATCCTGCAAGGAACAACTCTCTTTCTGTAGAGAATGCATCTGGAGTCACCTCTGAGTGCAAAACTGATGTAAACCACGAGTCTGATATCTCAAAGGCTTCTAAAGAATGGAAACAAGAACAGCTACAAGTATCTCCAAAAGAGACTCAAAGCAAACAAGTTCAAATGCAGGGTGTTGCAGTGGGGCGTGCTGTGGACTTGACTGCATTGGATGGTTATGATCAACTTGTGGATGAGTTGGAGAAGATGTTTGAGATAAAGGGACAGCTTCAACACAGGAATAAGTGGGAAATTGTCTTCACTGATGATGAAGGGGATATGATGCTTGTTGGTGATGATCCATGGCCTGAATTCTGTAATATGGTGAGAAGAATCTTCATTTGTTCAAGCCAGGATGTGCACAAATTGAGCTCAGGGAGCAAACTGCCTATCTCTTCTATGGAAGAGATTGTAATAAGCTCAGACACAGCAGAGACATGA 1296 0.4174 MPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTNQFIVSVNKYLEAINQKCNVGMRFRTRFEGDESPENDKRFSGTIVGVEDISPHWVNSNWRSLKVQWDETASFTKPDRVSPWDIEPIVASVPTTSSQPAVIKNKRPRQASEVPDIGDTPLAAPTFWDAGITQSDMTQLTVMTESKRCDTSTHMWHHNSKSSNNGVSSMNQTEASWLSSPSKLYHDTTDDNKSISAWPISKPHSERLNNDHFLDQVDKEINKVEAATSCRLFGIDLIDPARNNSLSVENASGVTSECKTDVNHESDISKASKEWKQEQLQVSPKETQSKQVQMQGVAVGRAVDLTALDGYDQLVDELEKMFEIKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVHKLSSGSKLPISSMEEIVISSDTAET 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1876 431 Pfam Auxin response factor 19 100 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aed9g1876 431 Gene3D - 318 409 - -
Aed9g1876 431 SUPERFAMILY CAD & PB1 domains 325 397 - -
Aed9g1876 431 PANTHER AUXIN RESPONSE FACTOR 1 421 - -
Aed9g1876 431 Gene3D - 54 127 - -
Aed9g1876 431 Pfam AUX/IAA family 254 408 IPR033389 -
Aed9g1876 431 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 421 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed9g1876 431 ProSiteProfiles PB1 domain profile. 321 402 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1876 Aed-Chr9 22315033 22321706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1876 9 414 B3 DNA Binding Superfamily AT4G23980 47.332 5.48e-120 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1876 K14486 - gmx:100799088 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1876 9 22315033 22321706 Aed2g1322 2 12818960 12824395 PCT