Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1871 ATGCAGATAGGTAAGATGAAGCTAGATGAGGATTTAGGTCCTGATCGTGAAGATGATTTCCAAACTGATGATGAAGAAAATCAGGCACAAAGGGTGTTTCAACATTTGGGTGATGATGATACCGATTCAGATAATTCACCTGCTTCAGGAGATTTGTCCAATGAGGATGATGTTTCCCTTACCTCTTGGCCTCAAAGTTATAGGCAATCTATGGACATGTTGACTAGTGCAACACCACCTGGAATGAGTTTCCTAAGAAGAGGTAATTACTCTCCCACTTCATCATTCAAGAGATCTCAAGAAAATCAAGAGGACTCTTCTTTGACTCTACCTCTAGTTGAGGAGACAACTTTAATCAAACAAGAGGATCGTCCTGTCACAACATCCTATCTGCAATCACTTGTCACTAGCAGTGCAAGATGTTCTATGCATGAATTGCCACCGCCACAACAACAATGTTCAGTTTTAAAATCAGTCATTAATGGAACCAATATATTATTTGGGATAGGAGTTCTCACCATTCCATATGCAATGAGAGAAGGAGGCTGCCTGAGCCTTCTAATACTTCTAGCTTCTTGTGTTGAGTATATAATACTAGTCAGTGACAACCTCTCATCACTGTTTCCAAACACCCACATGAGAGTTGGTGGGACTGATTTTAACAACGAGAAAATTTTCGCCATCACAGCAGCTATTATTGTTCTACCAACAGTTTGGCTGAAGAATCTAAGCTTGCTTTCTTATATTTCAGTTGGAGGAATATTTGCAACAACACTTGTTTCACTCTGCTTGTTTTGGGTTGGGTTGGTAGACCAAGTTGATGGATTCAAGCCAGGAGAAAAAATTATAGACTTTTCAAACATATCTGTCTCAATTGGTCTCTATAGTTTTTGCTTTGCTGGCCATGCAGTTTTTCCTAACATCTACTCTTCCATGAAGGAACCATCCAAATTCCCCTCAGTCTTTGCCTTTTGTGTTGTTATGTACATAGGTGTGGGAGTTATGGGCTATATAACGTTTGGTGACTCGGTTGCATCTCAATTTACCTTAAACATGCCAAAAGAGTTATATGCATCTAAGATTGCAACCTGGACAACGGTTGTGACTCCATTGGCAAAATATGCCTTAACGTTATTGCCTATTGCATTGAGCATAGAGGAACTCACCACCTCTCCTAGGCTAAGATGTCATGCTATTTCTGTTCTTATCAGAACATGTTTAGTGATTATGAGTTTAATTGTGGCTCTCTATTTTCCATATTTTGGTTCTTTGATGGCACTAATTGGTTCTTTCATGTCAATACTAGTTGCACTTCTTTATCCTTGCGCATGTTTCCTCAAGATACATAGTGGTAGATTAACAAATTTAGAGATAACAAATTGTGTTGTGATCATTATTGTGGGGCTGATATGCGCTTTTGTTGGAACACATTCAGCTATTTCAAAAATAGCTAGTGAAGGGGACTGA 1467 0.3906 MQIGKMKLDEDLGPDREDDFQTDDEENQAQRVFQHLGDDDTDSDNSPASGDLSNEDDVSLTSWPQSYRQSMDMLTSATPPGMSFLRRGNYSPTSSFKRSQENQEDSSLTLPLVEETTLIKQEDRPVTTSYLQSLVTSSARCSMHELPPPQQQCSVLKSVINGTNILFGIGVLTIPYAMREGGCLSLLILLASCVEYIILVSDNLSSLFPNTHMRVGGTDFNNEKIFAITAAIIVLPTVWLKNLSLLSYISVGGIFATTLVSLCLFWVGLVDQVDGFKPGEKIIDFSNISVSIGLYSFCFAGHAVFPNIYSSMKEPSKFPSVFAFCVVMYIGVGVMGYITFGDSVASQFTLNMPKELYASKIATWTTVVTPLAKYALTLLPIALSIEELTTSPRLRCHAISVLIRTCLVIMSLIVALYFPYFGSLMALIGSFMSILVALLYPCACFLKIHSGRLTNLEITNCVVIIIVGLICAFVGTHSAISKIASEGD 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1871 488 PANTHER OS05G0424000 PROTEIN-RELATED 189 483 - -
Aed9g1871 488 MobiDBLite consensus disorder prediction 73 107 - -
Aed9g1871 488 Pfam Transmembrane amino acid transporter protein 189 480 IPR013057 -
Aed9g1871 488 MobiDBLite consensus disorder prediction 87 107 - -
Aed9g1871 488 PANTHER OS05G0424000 PROTEIN-RELATED 45 191 - -
Aed9g1871 488 PANTHER AMINO ACID TRANSPORTER AVT1D 45 191 - -
Aed9g1871 488 PANTHER AMINO ACID TRANSPORTER AVT1D 189 483 - -
Aed9g1871 488 MobiDBLite consensus disorder prediction 1 60 - -
Aed9g1871 488 MobiDBLite consensus disorder prediction 25 42 - -
Aed9g1871 488 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1871 Aed-Chr9 22269782 22274230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1871 6 486 Amino Acid or Auxin Permease AAAP Family AT5G02180 43.376 8.94e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1871 K15015 - pop:7468814 479.944