Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1863 ATGGTTGAGTCAGCCATGTCAAAGAAAACAATGATGATGGAGGAGGAAGTAGTAGTAATGTCAAGTTGGTCAGAGGGGTCAGAGGATGATGACCTTGTGAGAGAGCTTTTAGATGATGATGGGTCTCCCCTTCTTCTTATTGAATCCCCACCCAACAACACAACAACAACAACAACAACAAAACCACCCTCTTCAAGTGGTGATGACCATGACCAAGACCAAGCCTTTAATAGGTTCATCTCCAACATTTACTCAGGACCTACCATCTCAGATATTGAAAATGCTTTAGTTTCTATATTGGAAAGGGGTTTGAGTAAGATTGAGAATAAGTATACTCTGAAAATCAAATGCTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGGAAGAGTTACTATAGGTGCACCAACCCAAGGTGCAGTGCCAAAAAGCAAGTTGAGAGATCCAATGAGGACCCTGACACTCTAATCATAACTTATGAAGGCCTCCATTTGCACTTTGCTTACCCATATTTCCTCATGGGCCAACAACAACCGTCTCAATCACACCCACCAATCAAGAAGCCCAAGCCCACATCTTCACAGACCCAAGCCCAAGATCATAGAGTAGATTATGTTCACGAAGCCCAGCATACACAAGAAGCCCATGGAGCCCAATCAAATGCTACTTTAGGCGTGATGTCATCCACTTCATTGGGCTCTACACAAGGCTTGGGCGAAGAAAACTTGGGCTCACAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTCGGAACCCCTCAAACGATGCCAATAGTGCTCACACGAAATTTTCTTGTTCTTCATATCGTTCTCCTCCAACATCACCTCTTTGGACTTCAACTTATTCCACCACGTGCTATAGCGTTGGCTTAAATTCTAGCACTTGA 912 0.4386 MVESAMSKKTMMMEEEVVVMSSWSEGSEDDDLVRELLDDDGSPLLLIESPPNNTTTTTTTKPPSSSGDDHDQDQAFNRFISNIYSGPTISDIENALVSILERGLSKIENKYTLKIKCFGNGMGDDGYKWRKSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPYFLMGQQQPSQSHPPIKKPKPTSSQTQAQDHRVDYVHEAQHTQEAHGAQSNATLGVMSSTSLGSTQGLGEENLGSQGLLEDMVPFMVRNPSNDANSAHTKFSCSSYRSPPTSPLWTSTYSTTCYSVGLNSST 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1863 303 ProSiteProfiles WRKY domain profile. 126 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g1863 303 SUPERFAMILY WRKY DNA-binding domain 121 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed9g1863 303 MobiDBLite consensus disorder prediction 47 65 - -
Aed9g1863 303 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 22 272 - -
Aed9g1863 303 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 272 IPR044810 GO:0003700
Aed9g1863 303 Pfam WRKY DNA -binding domain 128 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g1863 303 MobiDBLite consensus disorder prediction 45 72 - -
Aed9g1863 303 SMART WRKY_cls 123 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g1863 303 MobiDBLite consensus disorder prediction 178 201 - -
Aed9g1863 303 Gene3D WRKY domain 118 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1863 Aed-Chr9 22231422 22233868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1863 71 265 WRKY Transcription Factor Family AT5G43290 38.197 1.86e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed9g1863 WRKY 1.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1863 - - gmx:100810459 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1863 9 22231422 22233868 Aed9g1863 9 22231422 22233868 ECH