Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1855 ATGACAATGGATCCACGTCTTCGTGGGTTTAATGATCCCCCTAATGAAATCCAGTTGGGGAATCAGAGTTTTGAAAATGGTTTCTTTAATCAAAGTAGGGAAATTGGTTACCTTCAGTCCAATCTAGTAGTACCAACTCACACCACACCTTCTTCATCCTCGGTTTGGACTCATGAGGAGCCTTCTCCGGAGGATTGTGAATTTTCTGATGGAATTTTGAGTTACATCAGTCAGATCCTTATGGAAGAAGACATGGAAGATAAGACATGCATGTTGCAAGATTCTTTGGATCTTCAAATTGCTGAGAGATCATTCTATGAGGTGATTGGTGAAAAGTACCCTTCTTCGTCTTTAGGGCATCCAAGTTCTGTTGATCCAGATGATGGGGGTGGTGGGGATCATAATTTCTCTGAAAACTATGCTACTTGTTCTTACAATGATGGTGACCTCAGTAGTATTTTTACTAACAATTCTTTGCGGCAAAATTTGGGGGAACTTCCTAACCAGAATTTTCAAGGCAATAATAGCATTTCACAGTCATCTTATAGCTCTTCAAACAGTGTGATAAGCAGTGTGGAAGGTGGTCCTGTGGACTCTCCAAACAGTATTCTCCAGGTTCCTGAGATGAACAGTGAGACTCAATCCATTTTGCAATTTCAGAAGGGTGTTGAGGAGGCTAACAAGTTTCTTCCAAGTGGAAATGGACTCTTTGCTAATTTGGTTGTGGCTAATTTTTCAACACTAGGTCCTAGAGTTGGGAGCGATGAATTGCCGGTTAAGGTGGAGAAGGATGACGGTGAGTCTTTTCCTGCTGGATCCAAAGTAAGGAAGCATCATCACAGGGAAGAGGGGGATGTTGAAGAAAATAGAAGCAGCAAGCAAGCCGCAATTTTCTCCGAACCTACATTGCGATCATCCATGATTGATATAATTCTGCTTCATAGTTTAGGGGATGGTAAGAAGCATTTTATGGCCCGCCGTGAGGCTTTGCAAACTAAGAATGACAAGATAGTACTGTCATCAAATGGTAAATCAAAGGCTTCAAACAGTGGTAAGGGGCGTACTAAGAGACAAAATGGGAAAAAGGAAGTGGTTGATTTGAGAACACTTTTGGTTCTTTGTGCACAGGCTGTTGCAGCAGATGACCATAAAGGCGCACATGAGTTGCTGAAACGGATCAGGCAGCACTCGAACTCTTTTGGGGATGGAAATCAGAGGCTGGCTCATATCTTTGCTGATGGCCTTGAAGCGCGCTTGGCCGGTACTGGTAGCCAAATTTATAAAGGACTTGTTAGCAAAAGAACATCAGCTGCTGATTTTCTGAAGGCCTATCATCTATATCTTGCTGCTTGCCCTTTTAGAAAGATGACTGCTTTTGTCTCTAATGTTACAATAAGGAAAGCTTCAGAAAATTCACCAAGGCTGCATGTTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCTACTTTAATTCAGAGACTTGCATTAGCAGGAGGAGCACCTAAACTTCGGATTACAGGAATAGACTTCCCACAACCTGGTTTCAGGCCAGCCGAGAGAATTGTAGAAACTGGACGCCGCTTGGCGGCATATGCTGAATCATTTAAGGTGGAATTTGAGTACAATGCTATAGCAAAAAAATGGGACACAATTCAACTTGAGGAACTCAAGATTGATGGGGATGAGTACCTTGTTGTTACCAGTTTTTATCGCAGTAAAAATGTGCTAGATGAATCTGTGGTTGTGGACAGTCCGAGGAACAAATTCCTCAGCTTGGTAAGGAAGATCAACCCGGATTTATTCATTCATGGGATTACCAATGGGGCCTTCAATGCCCCTTTCTTTGTTACTCGATTCAGGGAGGCACTGTTTCACTACTCTTCACTTTTCGACATGCTTGAAACCATTGTGCCTCGTGAGGACTGGGAGAGGATGCTAATCGAGAAAGAAATATTTGGCCGCGAGGCATTGAATGTCATAGCTTGTGAAGGCTGTGAGAGAGTAGAGAGGCCAGAGACATATAGGCAGTGGCAAGCCCGGATTCTAAGGGCTGGATTTTTGCAACAATCTTTTGAGCGCCAGACAGTAAAGAGGGCAATAGAGAAAGTAACAATTAGCTACCACAAGGATTTTGTAATTGATGAAGATAGCCAATGGCTATTGCAAGGTTGGAAGGGGCGAATCATCTTTGCCCTCTCTTGTTGGAAACCTGCATGA 2220 0.4293 MTMDPRLRGFNDPPNEIQLGNQSFENGFFNQSREIGYLQSNLVVPTHTTPSSSSVWTHEEPSPEDCEFSDGILSYISQILMEEDMEDKTCMLQDSLDLQIAERSFYEVIGEKYPSSSLGHPSSVDPDDGGGGDHNFSENYATCSYNDGDLSSIFTNNSLRQNLGELPNQNFQGNNSISQSSYSSSNSVISSVEGGPVDSPNSILQVPEMNSETQSILQFQKGVEEANKFLPSGNGLFANLVVANFSTLGPRVGSDELPVKVEKDDGESFPAGSKVRKHHHREEGDVEENRSSKQAAIFSEPTLRSSMIDIILLHSLGDGKKHFMARREALQTKNDKIVLSSNGKSKASNSGKGRTKRQNGKKEVVDLRTLLVLCAQAVAADDHKGAHELLKRIRQHSNSFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKRTSAADFLKAYHLYLAACPFRKMTAFVSNVTIRKASENSPRLHVIDFGILYGFQWPTLIQRLALAGGAPKLRITGIDFPQPGFRPAERIVETGRRLAAYAESFKVEFEYNAIAKKWDTIQLEELKIDGDEYLVVTSFYRSKNVLDESVVVDSPRNKFLSLVRKINPDLFIHGITNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERVERPETYRQWQARILRAGFLQQSFERQTVKRAIEKVTISYHKDFVIDEDSQWLLQGWKGRIIFALSCWKPA 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1855 739 MobiDBLite consensus disorder prediction 114 136 - -
Aed9g1855 739 PANTHER SCARECROW-LIKE PROTEIN 9 32 738 - -
Aed9g1855 739 MobiDBLite consensus disorder prediction 256 290 - -
Aed9g1855 739 ProSiteProfiles GRAS family profile. 358 737 IPR005202 -
Aed9g1855 739 Pfam GRAS domain family 367 737 IPR005202 -
Aed9g1855 739 MobiDBLite consensus disorder prediction 165 204 - -
Aed9g1855 739 MobiDBLite consensus disorder prediction 335 360 - -
Aed9g1855 739 MobiDBLite consensus disorder prediction 253 298 - -
Aed9g1855 739 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 738 IPR005202 -
Aed9g1855 739 MobiDBLite consensus disorder prediction 335 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1855 Aed-Chr9 22178020 22180239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1855 6 738 GRAS Transcription Factor Family AT2G37650 50.670 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed9g1855 GRAS 1.5e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1855 - - gmx:100801824 1312.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1855 9 22178020 22180239 Aed9g1855 9 22178020 22180239 ECH
Aed9g1855 9 22178020 22180239 Aed1g1231 1 11795280 11797022 ECH