Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1850 ATGGGTGCTTGCTGGAGTAATAGGATTAAGGCTGTGAGTCCTTCCAATACAGGGATCACTTCTAGAAGTGTCAGCAGGAGTGGCCATGATATCAGCTCAAATAGCAGGAACTCATCAGCCTCCATATCCGTTACTTCTCGGAGTGAGGGTGAGATCTTGCAATCTTCCAACTTGAAAATCTTCAGCTATAATGAGCTAAGAGCGGCCACTAGAAATTTCCGCCCGGATAGTGTCTTGGGGGAGGGTGGCTTTGGTTCAGTCTTTAAAGGCTGGATTGATGAGAATTCACTTACTGCTACCAAACCAGGAATAGGCATGATTGTTGCTGTGAAGAGGCTCAACCAAGAAGGATTCCAGGGTCACAGAGAGTGGTTGGCTGAAATCAACTATCTCGGTCAATTACAGCATCCTAATCTTGTCAAGTTAGTAGGATACTGCTTTGAGGATGAACACCGGCTTCTAGTTTATGAATTTATGCCTAAGGGTAGCATGGAAAATCATCTATTCAGAAGAGGTTCTTACTTTCAGCCATTCTCTTGGAGTTTGCGACTGAAAATAGCACTTGGGGCTGCAAAAGGTCTTGCTTTTCTTCACAGTACAGAACCTAAAGTCATATACCGTGACTTCAAAACTTCAAATATCCTACTTGATACAAACTATAATGCCAAACTTTCGGATTTCGGGTTGGCCAGAGATGGTCCTACTGGTGATAAAAGCCACGTCTCTACTAGGGTCATGGGAACCCGTGGGTATGCAGCGCCAGAGTATTTAGCAACAGAAAGGCTTCTGCTTATCCTAGACCTTCTGCTTCCCTCCTCCGCGGTTGAGAGTTTTGTGACGCAGCCAGTAGCAAGCAGAACAAGAAAGAGTCAGAGGTTTAGGTGTGGCATGAACCATATATTTATGTAA 909 0.4466 MGACWSNRIKAVSPSNTGITSRSVSRSGHDISSNSRNSSASISVTSRSEGEILQSSNLKIFSYNELRAATRNFRPDSVLGEGGFGSVFKGWIDENSLTATKPGIGMIVAVKRLNQEGFQGHREWLAEINYLGQLQHPNLVKLVGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRLKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDTNYNAKLSDFGLARDGPTGDKSHVSTRVMGTRGYAAPEYLATERLLLILDLLLPSSAVESFVTQPVASRTRKSQRFRCGMNHIFM 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1850 302 SUPERFAMILY Protein kinase-like (PK-like) 40 260 IPR011009 -
Aed9g1850 302 MobiDBLite consensus disorder prediction 13 42 - -
Aed9g1850 302 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Aed9g1850 302 ProSiteProfiles Protein kinase domain profile. 73 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1850 302 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Aed9g1850 302 PANTHER KINASE 1B 22 262 - -
Aed9g1850 302 PANTHER OS01G0588500 PROTEIN-RELATED 22 262 - -
Aed9g1850 302 Gene3D Transferase(Phosphotransferase) domain 1 159 268 - -
Aed9g1850 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Aed9g1850 302 Pfam Protein kinase domain 76 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1850 Aed-Chr9 22109300 22112528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1850 49 262 Glycoside Hydrolase AT3G07070 50.698 6.74e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed9g1850 Pkinase 2.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1850 - - gmx:100793817 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1850 9 22109300 22112528 Aed9g1850 9 22109300 22112528 ECH