Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1849 ATGTGTGTCCCTTATCATTCGCGTGCCCTTTGGTTTCTTTCTCGCATATTAAGCGCTGAAACTGACGTACCCTCTCTTTCTCTCTGTCATACTGTGGGGTCTCTCTACCATGTCTTGTCTTATCACGCTTTCCTCTCTCTCTCTCTGGTCCATTCTACCTCACTTCTCTGTCTTTACTCCAACACTCTCTCTCCCTCGGTTTCCACTTTCTCTCTGTTTAAGAACCCACCACTTCTTCAACTTGCTGCCGTTCTTTCATGGACCAGAACAACACCTCTTAGCTTCTTTCACTTTTCACTCACACACCCAATCTTGGTGAGTCAGACCATTTCTTCTTCGTTTTTTCATGTCTTTAACCATCTGGGGTGCCTCCATTTTCTCACTTCACGTGTAGGAACCATTTGGGGTGCCATGCTATGCTACCTAGATAGGCAACGTTGGAGAGCTGAAGAGGATGCTTTGCTTCGCGCATATGTCAAACAATATGGTCCTAGGGAATGGAATCTCGTGTCTCAGCGCATGAACACGCCTCTTAACAGGGATGCAAAGTCGTGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGCATTAAGAAAGGATCTCTAACTGAGGAAGAGCAGCGTCTTGTCATCAACCTTCAAGCAACGCACGGTAACAAGTGGAAGAAGATTGCAGCACAGGTCCCTGGCCGAACCGCGAAGAGGCTAGGGAAGTGGTGGGAAGTGTTCAAAGAGAAGCAGCAAAGGGAAACAAAGGGGAATAGCTGCACCATTGATCCGATTAACGACAGCAAGTACGAGCATATACTTGAGAGTTTTGCAGAGAAGCTAGTGAAAGAGAGGCCTTCGCCATCATTTGTTATGGCTACTTCCAACAGTTCTTTTCTGCATGCTGATGCACCAGCGCCTGCACCGGCTTTGCTTCCGTCTTGGCTTTCCAACTCCAACGGCACTGCACCTGTGAGGCCACCTTCCCCTTCTGTGACTCTTAGTCTTTCTCCCTCGACGGTAGCTGCACCTCCTCCGTGGATGCAGCCTCCCGTGCGAGGGCCGGACAACACTGCTCCACTTGTTTTGGGGAATGTGGCGCCTCACGGGTCAGTTCTAGCGTTTGGCGAGAACATGGTGATGTCTGAGCTGGCGGAGTGCTGCAAGGAGTTGGATGAAGTGCATCATGCCTTGGCTGCGCATAAGAAGGAGGCGGCCTGGCGGTTAAGCAGGGTGGAGCTGCAGTTGGAGTCCGAGAAGGCCGGGCGTAGGAGGGAGAAGATGGAGGAAACCGAGGTGAAGATCAAGGCTCTGAGGGAGGAGCAAACAGCTGCATTTGATAGAATTGAAGCAGAGTACAGGGAACAGTTGGCAGGGTTGAGAAGAGATGCAGAAAGCAAGGAGCAGAAGTTGGCTGAACAATGGGCTGCAAAACACTTGCGTCTTAACAAGTTTCTAGAACAGGTAGGGTGCAGATCAAGGCTCACTGAACCAAATGGAAGATAG 1494 0.5027 MCVPYHSRALWFLSRILSAETDVPSLSLCHTVGSLYHVLSYHAFLSLSLVHSTSLLCLYSNTLSPSVSTFSLFKNPPLLQLAAVLSWTRTTPLSFFHFSLTHPILVSQTISSSFFHVFNHLGCLHFLTSRVGTIWGAMLCYLDRQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVINLQATHGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQRETKGNSCTIDPINDSKYEHILESFAEKLVKERPSPSFVMATSNSSFLHADAPAPAPALLPSWLSNSNGTAPVRPPSPSVTLSLSPSTVAAPPPWMQPPVRGPDNTAPLVLGNVAPHGSVLAFGENMVMSELAECCKELDEVHHALAAHKKEAAWRLSRVELQLESEKAGRRREKMEETEVKIKALREEQTAAFDRIEAEYREQLAGLRRDAESKEQKLAEQWAAKHLRLNKFLEQVGCRSRLTEPNGR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1849 497 Pfam Myb-like DNA-binding domain 147 208 - -
Aed9g1849 497 Gene3D - 144 198 - -
Aed9g1849 497 Gene3D - 202 262 - -
Aed9g1849 497 PANTHER TRANSCRIPTION FACTOR AS1 143 497 IPR031055 GO:0005634|GO:0006351|GO:0010338
Aed9g1849 497 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 143 497 - -
Aed9g1849 497 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 144 193 IPR017930 -
Aed9g1849 497 Coils Coil 446 466 - -
Aed9g1849 497 CDD SANT 203 244 IPR001005 -
Aed9g1849 497 ProSiteProfiles Myb-like domain profile. 144 193 IPR001005 -
Aed9g1849 497 SMART sant 198 246 IPR001005 -
Aed9g1849 497 SMART sant 143 195 IPR001005 -
Aed9g1849 497 CDD SANT 146 193 IPR001005 -
Aed9g1849 497 ProSiteProfiles Myb-like domain profile. 194 244 IPR001005 -
Aed9g1849 497 SUPERFAMILY Homeodomain-like 144 238 IPR009057 -
Aed9g1849 497 Coils Coil 407 444 - -
Aed9g1849 497 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 194 248 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1849 Aed-Chr9 22093719 22096580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1849 143 488 MYB Transcription Factor Family AT2G37630 64.463 1.37e-151 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed9g1849 Myb_DNA-bind_6 4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1849 K09422 - gmx:100819082 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1849 9 22093719 22096580 Aed9g1849 9 22093719 22096580 ECH