Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1843 ATGGGTAACCGAATCGGCAATCTCTGCCTCTGTTCCTCCGGCGACGCCTCAGGAAGGCTCAAGAACAGAGTTCCCTTCCTCTCCAAGCAACACCACCGGAATTCCCTCGGAAACTCTATCTGCTACGTGAGACCCGACACGTGTCAGTTCTCCGACGATGACTTGACTATCCGGTCAGTGTCCGGCGCCACCGTGAGTGCAAACACGTTGGCGACGCCTTCAACTTTGCTCGATGATGCGGTTCAACACAGCGTTGTTTTAGATTCCTCTGCTACATTTGAGAACTCTGGCTCCTTTACTTCCACCTTGGTGCCTTTTCAGCATCAACATGATCGTGAATTCCGAGGCTCCATGGAAAGAGGGTTGTATGGGGATCCTCGTGATCGTGTGATGAACGTCGAAGGGCCTGTTGAGAAAGCAATGAAGAAGAGTAAATGGAATTTGAAAAAGGTTCTGAGTAGAGCTTTTAATAGTATTGGGAGAATGTGTATGAAGACAAATGATAACGCTAATGCGAGACTGAGTTTTAGTGTTAGTTTGAGTGATGAGATCATGAGTTCGGATGGTGGTATCTATATGGATGATGATAATATGTTAATGGGGTGTGAGAATCTTCTATGGGCTCATGGTAGAGCCGGTGAGGATCGTCTGCATATTGTGATTTGTGAGAGTCATGGATGGGTTCTTGTGGGGATTTATGATGGTTTTAATGGCCCTGATGCCACTGATTTTCTTCTCAACAATTTGTTCTTTGCTGTGAATGATGAGCTCAAGGAGATCTTGTGTAGTCGCAATGGAGTGGTTGGTGGTGGTTGTTTTTCAAGTGAAAACAAAGAGAACTATCCAATGGGAAATGAAGAGTTAAATTTGGAATCTGGCGTGTCTGAAGGAGTGGATGGAACAAATGAGATAAAGAATGAAAAAGTGGAATTGAGTCACTCAGATGTGTTGCAAGCTCTTTCAGAGGCATTGAGGAAAACCGAGGATGCATTTTCGAAGAATACTGATGAGATGATTGGTCACAACCCTGTGTTGGCTATGATGGGTTCATGTGTTTTGCTGATGTTTATGAAGGGTAAAGATGTTTACTTGATGAATGTGGGAGATAGCCGTGCTGTGTTGGCCACTCACCATGGAGAGTCAATTCAACTCACAAATGAGCACACCACTCATGTGGAAGAGGAGGTTTCCAGAATCATGAGGGAGCATCCTGATGACCCTTTAGCAGTAACCAACCGCCGGGTGAAGGGTTGCTTGAGTGTCACAAGGGCTTTTGGGGCAGGGTTCCTTAAGCAGCCTAATAAAAACAATGCAATATTAGAGCCATTCAGAGTGAACTACATAGGAGAATCTCCATACATCACATGTTTCCCTTCACTCCACCACCACAAGATCACCGCAAATGACAAGTTCATCATACTGTCTTCAGATGGACTTTACCAATACTTCACCAATGAAGAAGCTGTTGCCAAAGTAGAGTCATTCATGATCATGTTTCCTGATACAGACCCTGCATACCTTCTCATTGAAGAAGCACTTGGTCGAGCAGCAATAAAAGCTGGTTTGGAGATCCATGAGTTGCTTGATATTCAACAAGGGGATCGCCGTCGTTATCATGATGACATGTCTGTTGTCGTAATCGACTTAGAGGGAAAAATATGGCGTTCATCGATATAA 1677 0.446 MGNRIGNLCLCSSGDASGRLKNRVPFLSKQHHRNSLGNSICYVRPDTCQFSDDDLTIRSVSGATVSANTLATPSTLLDDAVQHSVVLDSSATFENSGSFTSTLVPFQHQHDREFRGSMERGLYGDPRDRVMNVEGPVEKAMKKSKWNLKKVLSRAFNSIGRMCMKTNDNANARLSFSVSLSDEIMSSDGGIYMDDDNMLMGCENLLWAHGRAGEDRLHIVICESHGWVLVGIYDGFNGPDATDFLLNNLFFAVNDELKEILCSRNGVVGGGCFSSENKENYPMGNEELNLESGVSEGVDGTNEIKNEKVELSHSDVLQALSEALRKTEDAFSKNTDEMIGHNPVLAMMGSCVLLMFMKGKDVYLMNVGDSRAVLATHHGESIQLTNEHTTHVEEEVSRIMREHPDDPLAVTNRRVKGCLSVTRAFGAGFLKQPNKNNAILEPFRVNYIGESPYITCFPSLHHHKITANDKFIILSSDGLYQYFTNEEAVAKVESFMIMFPDTDPAYLLIEEALGRAAIKAGLEIHELLDIQQGDRRRYHDDMSVVVIDLEGKIWRSSI 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1843 558 ProSiteProfiles PPM-type phosphatase domain profile. 199 549 IPR001932 -
Aed9g1843 558 SMART PP2C_4 198 547 IPR001932 -
Aed9g1843 558 Pfam Protein phosphatase 2C 304 496 IPR001932 -
Aed9g1843 558 Gene3D - 179 555 IPR036457 -
Aed9g1843 558 PANTHER PROTEIN PHOSPHATASE 2C 19 558 IPR015655 GO:0004722|GO:0006470
Aed9g1843 558 CDD PP2Cc 212 549 IPR001932 -
Aed9g1843 558 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 19 558 - -
Aed9g1843 558 SUPERFAMILY PP2C-like 212 550 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1843 Aed-Chr9 21993841 21996166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1843 1 558 PP2C-type Phosphatase Gene Family AT2G28890 41.416 1.74e-153 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1843 - K01102 gmx:100794388 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1843 9 21993841 21996166 Aed9g1843 9 21993841 21996166 ECH