Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1841 ATGCCTTCGAGTTCTTCTTCTTCTGTAACCATTCCCAATTTGCGTCTTCGCGCTCTCAGAATCTGGTCCTCGAAGGACTACGCAATCGCCGCATTCATCTTCCTCGTCCTCTTCTCCCTCCTCCTCTTCTCCCACTTGGATTCCCGTTCCCGTTTTCATTCCCATTCCGACTCCGACTCCCGCCCCGACAACCTCGTTCCCTTAACGCTCCTCCGCAACGCCAACCAAACACGCGCGCTTTGCTTGGACGGAAGCACCCCTGGTTACCATTTCCAAAGCGGGTTCGGATCCGGATCCCGCAATTGGTTGATCCACATTGAGGGAGGAGGCTGGTGCAATTCGATATCTTCATGTTCTCAGCGAAAATTCACTCATTTGGGGTCTTCCAATTATATGGAAAAACTTGTTCTTTTTTCAGGAATATTGAGCTCTGACCCTGCTCAGAACCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGACGGTGCATCTTTTGCCGGTCACCCAGAGAGTGAGCAGAGAGAAAGTGGGTTGTTCTTCAGAGGCCAGGTCATATGGGAAGCTATTATGGATGAACTCTTGTCAACTGGCCTGTCTAAAGCAAAGCAGATATGTCTCACTCCAGACTCCAAATTATATGCTTTTGACATATGCACTGCTTATGCTTTGCTTTCAGGATGCTCTGCTGGAGGGTTGGCAACTCTTATACACTGTGATAACTTCCGACAAGTACTTCCAAAGGAAGCAACTGTCAAGAAGGATATTAGTGGAAACAGTACAATGAGATCTTTCTATCATGATGTTGTCCAACTTCAGGGTCTTGCAAAAAGTTTGCACAGCAATTGCATTGCTAAAATGGAACCATCTAAGGCAGAAATTGTTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGCTTATGATTTCTGGCAGATACGCAATATTTTGGTGCCTAAAGGATCAGATCCCCATGATCACTGGCAAAGCTGCAGACTGAACATTCGCAATTGTAATACTAACATGATTGATAAACTTGACAGTTACCGTGGCTCTTTGCTGAAGGCTGTGAATGAATTCCAACCACGAAAGGAGATTGGAATGTTTATAGATTCCTGCTTTGTCCATTGCCAAACTGAGATGCAAGTGACGTGGCATTCGCCCAACTCTCCTAAAATAAATGATAAGACAATTGCTGAATCTGTTGGTGATTGGTACTTTGACCGAGAAGCTGTTAATAAGCGCATTGACTGCTCGTCTTTTCCGTGCAATCCCACTTGCCACAATATGGATTTCACCTGA 1311 0.4508 MPSSSSSSVTIPNLRLRALRIWSSKDYAIAAFIFLVLFSLLLFSHLDSRSRFHSHSDSDSRPDNLVPLTLLRNANQTRALCLDGSTPGYHFQSGFGSGSRNWLIHIEGGGWCNSISSCSQRKFTHLGSSNYMEKLVLFSGILSSDPAQNPDFFNWNKVKIRYCDGASFAGHPESEQRESGLFFRGQVIWEAIMDELLSTGLSKAKQICLTPDSKLYAFDICTAYALLSGCSAGGLATLIHCDNFRQVLPKEATVKKDISGNSTMRSFYHDVVQLQGLAKSLHSNCIAKMEPSKAEIVKNIKTPLFLVHPAYDFWQIRNILVPKGSDPHDHWQSCRLNIRNCNTNMIDKLDSYRGSLLKAVNEFQPRKEIGMFIDSCFVHCQTEMQVTWHSPNSPKINDKTIAESVGDWYFDREAVNKRIDCSSFPCNPTCHNMDFT 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1841 436 PANTHER NOTUM-RELATED 21 211 IPR004963 GO:0016787
Aed9g1841 436 PANTHER NOTUM-RELATED 224 431 IPR004963 GO:0016787
Aed9g1841 436 Pfam Pectinacetylesterase 63 213 IPR004963 GO:0016787
Aed9g1841 436 Pfam Pectinacetylesterase 225 413 IPR004963 GO:0016787
Aed9g1841 436 PANTHER PECTIN ACETYLESTERASE 4 21 211 - -
Aed9g1841 436 PANTHER PECTIN ACETYLESTERASE 4 224 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1841 Aed-Chr9 21979956 21987520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1841 9 400 Carbohydrate Esterase AT3G09410 52.068 6.16e-148 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1841 K19882 - gmx:100792819 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1841 9 21979956 21987520 Aed9g1841 9 21979956 21987520 ECH