Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1838 ATGTCTCCAGCTGCAGGTTCATCAAGATGGAGCCCTACCACAGAACAACTCATGATCTTGGAGGAACTTTACAGGAGTGGCATTAGAACTCCCAGTGCCTCTCAAATTCAGCAAATAACCACACACCTTTCTTTCTATGGCAGGATAGAGGGAAAGAATGGAGAAGCTGCAAACACATCAGAACAAGCATTGAGTTGCAAATGGAGTAATGTGCACAGCCCTCAGATTAATTTGGTGGAGAATAATAATGAGGTGACATTCTGCAACTATGGTTGGACACTTGTGGATGTTGATAATCATCAAGCATCTTCATGTTGCACTACTCGACCTCTCAAGACTCTTGATCTCTTCCCACTCACAACCACCAGAAACAATAATGAAGATTGCACCACACCAGTACCCAAGTAG 408 0.4363 MSPAAGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNGEAANTSEQALSCKWSNVHSPQINLVENNNEVTFCNYGWTLVDVDNHQASSCCTTRPLKTLDLFPLTTTRNNNEDCTTPVPK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1838 135 Pfam Homeodomain 8 44 IPR001356 GO:0003677
Aed9g1838 135 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 53 - -
Aed9g1838 135 PANTHER WUSCHEL-RELATED HOMEOBOX 3 61 130 - -
Aed9g1838 135 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 53 IPR044555 GO:0003700|GO:0099402
Aed9g1838 135 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 61 130 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1838 Aed-Chr9 21963708 21964961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1838 1 53 Wox Gene Family AT2G28610 81.132 6.92e-24 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aed9g1838 Homeodomain 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1838 - - gmx:102663963 127.872