Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1811 ATGGAGTGTGGAGTTGAGTTACAAGGGGGAGATCTGCATGCAAGGGTGGTAACTGAGCAAAACCCTATAGGTTTTGGCCCCACCATGGAAGATGAACACACTTTGGCGGTTGCTGAGAGAGAGATATGGCTGAATACTGACCAAGACGAGTTCCTAGGAGTCAACGATGCTTCCATGTTCTACGCTGATTTCCCTCCTCTCCCTGATTTCCCTTGCATGTCATCATCATCTTCATCCTCATCTTCAGCACAACCACTTCCTGTGAAGACCATGACATGTTCCACCACCACAACAACAACAACCACCACCACAACAACAACCACCACTTCTTCTTCTTCCTCTTCCTCCTCTTGGGCTATATTGAAGTCAGATGCTGAGGAAGATGCAGCAGAGAAGAACCATTGCAGCAACCGCTACATGCATGACCAGCTTGATGCAACTTTGTCTTCCACCGCTTCCATGGAGACAGTCTCTCAGCAGCAGAACCCTGATCCTGGCCTTGGTGGCACTGTTGGTGAGTGCATGGATGATGTTATGGACACTTTTGGCTACATGGAGCTTCTAGAGGCCAATGATTTCTTCGACCCTGCCTCTATCTTTCAGAATGATGAGGATAACGAGAACCCTTTAGTTGGATTTAGCACACTGGAGGAGGAGGGGGAGCAGGTTCCGTTGCGTGAAGAGGATCAACATGCAATGGTGCATCATCAGCAAGAGGAAGATCATCAGGTTCCTGTGTGTGAAGAAATCCAAGGAGATGATGGAGTTATTGTTGATGATGAGATGAGTAATGTGTTCTTGGAGTGGCTTAAGTCTAACAAGGACAGTGTTTCTGCTAATGATTTGAGGAATGTGAAGCTGAAGAAGTCGACGATCGAAAGCGCGGCGAGGCGGTTAGGTGGAGGTAAAGAAGCCATGAAGCAGTTGCTGAAGCTGATTCTTGAGTGGGTTCAAACCAGCCATCTTCAGAATAAGAGGCTCCGCAAGGAGAATAATAATGGTAGCAGTGTTAGCAGTGATGCGCTTCAAGCACAGTTTCAGGATCCTAGTGGCCAGAATAACCAGAACACACAACAAACTGCTTCATTTGCACCTGAATCAAACGCATGTTTCAATAACCAAGCACCTTGGTTGAGTCCTCAGGCGCCTTTTGCAGCAGATCAGGCTCCTATCATGGTGCCTCAACAGCAATTTCCACAACCCATGGTTGGGTATGTGCAGGGTGACCCTTACACTAGTGGTGGTGCAGAACAATACCACATGTTGGAGTCAGCACATTCATGGCCACATTCACAGTTCAATGTTGCTTCTCATCACTATAGCCAACCTTTTGGGGACAACAATGGTTTTTTCCCAGCACATGGGGGTTTTGGCGGCGGCTATGGCAATAACAACCAGTACCCTTATCAATTCTTTCACGGCCCTGGTGATAGGTTGATGAGGTTGGGACCCTCAGCGACGAAGGAAGCGAGGAAGAAGAGAATGGCGAGGCAGAGAAGGTTTTTCTCTCATCACCATAGGCATCATAATGGTAATCAGCCGATCCAAGGCGGCTCCGGCGACCCACATGCAAGATTGGGAGGTGGTGGTGATAATTGCACCACTGCTTTGGCTGCACCTCATCGTGCAAATCCCCCACCAGCCAATTGGATGTACTGGCAGTCTGCCATGGCGGGTGGTGCGGCTGGTCCTCTTGCGCCGGTTGTTCCGGCCGAGCTGTCGACCGGACAACAGGCAGTGGACCGGTCCGCCATGCAGACACAGAATTGTCATCAGAGTCGAGTTCCATCGGATAGGAGACAGGGTTGGAAGCCTGAGAAGAACTTGAGGTTCCTTCTGCAGAAGGTGTTGAAACAAAGCGATGTGGGAAGTTTGGGGAGAATAGTTTTACCAAAAAAAGAGGCAGAAACCCATTTGCCAGAGCTGGAGGCAAGAGATGGAATATCCATAACAATGGAAGACATTGGAACTTCACGTGTTTGGAACATGCGCTATAGATACTGGCCTAACAACAAAAGCAGAATGTATTTGCTCGAGAACACTGGAGACTTTGTGAGAGCCAATGGACTCCAAGAAGGAGATTTCATAGTGATTTACTCAGATGTCAAGTGTGGCAAATATATGATAAGAGGAGTGAAAGTGAGGCAACAAGGTGTGAAAGCAGAGAGCAAGAAAGCAGGAAAATCACAGAAAAACCAGCATGGGACTAACAACACATCAACTACAGCTGGAACTGCTGCTAATAATGGCACGCCATCGTCACCGAAAACAAAAGCTGAAAAAAGTAGTAGATTAATATAA 2301 0.4789 MECGVELQGGDLHARVVTEQNPIGFGPTMEDEHTLAVAEREIWLNTDQDEFLGVNDASMFYADFPPLPDFPCMSSSSSSSSSAQPLPVKTMTCSTTTTTTTTTTTTTTTSSSSSSSSWAILKSDAEEDAAEKNHCSNRYMHDQLDATLSSTASMETVSQQQNPDPGLGGTVGECMDDVMDTFGYMELLEANDFFDPASIFQNDEDNENPLVGFSTLEEEGEQVPLREEDQHAMVHHQQEEDHQVPVCEEIQGDDGVIVDDEMSNVFLEWLKSNKDSVSANDLRNVKLKKSTIESAARRLGGGKEAMKQLLKLILEWVQTSHLQNKRLRKENNNGSSVSSDALQAQFQDPSGQNNQNTQQTASFAPESNACFNNQAPWLSPQAPFAADQAPIMVPQQQFPQPMVGYVQGDPYTSGGAEQYHMLESAHSWPHSQFNVASHHYSQPFGDNNGFFPAHGGFGGGYGNNNQYPYQFFHGPGDRLMRLGPSATKEARKKRMARQRRFFSHHHRHHNGNQPIQGGSGDPHARLGGGGDNCTTALAAPHRANPPPANWMYWQSAMAGGAAGPLAPVVPAELSTGQQAVDRSAMQTQNCHQSRVPSDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQQGVKAESKKAGKSQKNQHGTNNTSTTAGTAANNGTPSSPKTKAEKSSRLI 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1811 766 MobiDBLite consensus disorder prediction 730 760 - -
Aed9g1811 766 MobiDBLite consensus disorder prediction 720 766 - -
Aed9g1811 766 MobiDBLite consensus disorder prediction 95 115 - -
Aed9g1811 766 MobiDBLite consensus disorder prediction 504 541 - -
Aed9g1811 766 Gene3D - 609 729 IPR015300 -
Aed9g1811 766 CDD BfiI_C_EcoRII_N_B3 611 712 - -
Aed9g1811 766 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 29 754 - -
Aed9g1811 766 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 29 754 IPR044800 GO:0003700
Aed9g1811 766 Pfam B3 DNA binding domain 614 710 IPR003340 GO:0003677
Aed9g1811 766 MobiDBLite consensus disorder prediction 582 596 - -
Aed9g1811 766 SMART B3_2 613 715 IPR003340 GO:0003677
Aed9g1811 766 MobiDBLite consensus disorder prediction 582 601 - -
Aed9g1811 766 ProSiteProfiles B3 DNA-binding domain profile. 613 715 IPR003340 GO:0003677
Aed9g1811 766 SUPERFAMILY DNA-binding pseudobarrel domain 612 708 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1811 Aed-Chr9 21687683 21692226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1811 40 758 B3 DNA Binding Superfamily AT3G24650 47.706 1.22e-167 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aed9g1811 B3 3.6e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1811 - - gmx:100795226 1137.48