Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1808 ATGGCGTTTGTGAAGAACAACCCTTTCTCTCTCCACAACATTTCCATGTCCTTGTTGTTGCTGTTCTTCGTCCTCTTCTTTTCTTGCTTCTGCAAAGGCAGTACAAAGCCACTGTCCCCCCCTTCTTCTTCACCACCCTCCACTACCACTGATGTCGAACTTCTATTGGGAAAGATCAAAGCTTCACTACAAGGCAACTCTGACAACCTCGTCCTGTCTTCATGGAACACCTCTCTCCCACTTTGTCAGTGGAGAGGCCTCAAATGGGTCTTCTCCAACGCCACTCCTCTCTCATGCACCGATCCCTCCTCTCCACAATGGACCAATCTCACTCTCCACAGAGACCCTTCTCTCCACTTGCTCTCCCTCCAGCTCCCTTCTGCAAACCTCACTGGCTCCCTCCCCAGAGAGCTTGGAGGCTTCCCTATGCTCCAAAGCCTCTACCTTAACATCAACTCATTAGAGGGTACCATCCCTCTTGAGCTTGGCTTCACCACTTCCCTCTCTGAGATTGATTTCAGTGACAACAACCTAAGTGGTGCTCTTCCACCTTCCATTTGGAACCTTTGTGAGAAACTTGTTTCTCTTAGGCTCCATGGTAATTCTCTATCTGGGTCTGTCTCTCAGCCTGCATTGCCCAACTCGTCTTGCAAGAATCTCAAGTTACTTGATTTGGGTGGAAACAAGTTCTCTGGGACTTTCCCTGAGTTCATCACAAGTTTTGGTGGGTTAAAGGAGCTTGATTTGGGGAACAACTTGTTTACTGGCACAATCACTCAAGGCCTAGCTGGTATCAGCCTTGAAAAATTGAATCTTTCTCACAATAACTTTAGTGGGGTGTTGCCTTTCTTTGGAGGAGAATCAAAGTTTGGTGTGGATGCTTTTGAGGGGAATAGCCCTAGCTTGTGTGGACCTCCTTTGGGAAGCTGTGCTGGGACTTCTACACTTAGCTCGGGTGCTGTTGCTGGCATTGTTATTAGTCTCATGACAGGTGCTGTGGTTTTGGCTTCTTTGCTGATAGGGTATATGCAGAACAAGAAGAGGAAGGGGAGTGGGGAGAGTGAGGATGAGTTGAATGATGAAGAGGAAGATGAAGAGAATAATGGTGGTGGTGCTGTTGGTGGAGGTGGTGAGGGGAAGCTTATGTTGTTTGCTGGAGGTGAGAATTTGGCACTGGATGATGTGTTGAATGCTACTGGCCAAGTTTTGGAGAAGACTTGTTATGGGACAGCTTATAAGGCTAAGCTTGCTGATGGTGGCACCATTGCTTTGAGGTTGTTGAGAGAAGGTAGCTGCAAAGACAAGGCTTCATGCTTGGCTGTTATTAAGCAATTGGGGAAAATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAGGGGAAGAGAGGGGAGAAGCTTCTAATTTATGACTACCTGCCTCTCAGAAGCCTTCATGATCTCTTACATGAAACTAAAGCTGGAAAACCAGTGCTGAACTGGGCTAGGCGACACAAGATTGCGTTGGGCATAGCGAGAGGTCTAGCTTATCTTCACACAGGACTTGAAGTTCCCATCACTCATGCAAACGTAAGGTCCAAGAATGTGCTTGTGGACGACTTCTTTGCAGCAAGGCTCACCGATTTCAGCCTCGACAAGCTGATGATTCCGTCCATAGCTGACGAAATGGTGGCACTAGCCAAGACAGATGGCTACAAGGCTCCCGAGCTTCAAAGAATGAAGAAATGCAACTCCAGGACCGACGTCTACGCTTTTGGCATACTGCTGCTCGAAATCTTGATTGGGAAGAAGCCGGGGAAGAGCGGAAGGAATGGTGGTGAGTATGTGGACTTGCCCTCGATGGTGAAAGTGGCGGTCTTGGAGGAGACGACGATGGAAGTGTTTGACGTGGAGCTTTTGAAAGGGATAAGGAGCCCTATGGAAGACGGGTTGGTGCAGGCACTGAAGCTGGCAATGGGGTGCTGTGCACCGGTGGCATCGGTTAGGCCAAGCATGGAAGAAGTTGTGAGGCAGTTGGAGGAGAATAGACCAAGGAACAGGTCTGCATTATACAGCCCTACAGAAACAAGAAGTGGAAGTGTTACACCATTTTGA 2097 0.4826 MAFVKNNPFSLHNISMSLLLLFFVLFFSCFCKGSTKPLSPPSSSPPSTTTDVELLLGKIKASLQGNSDNLVLSSWNTSLPLCQWRGLKWVFSNATPLSCTDPSSPQWTNLTLHRDPSLHLLSLQLPSANLTGSLPRELGGFPMLQSLYLNINSLEGTIPLELGFTTSLSEIDFSDNNLSGALPPSIWNLCEKLVSLRLHGNSLSGSVSQPALPNSSCKNLKLLDLGGNKFSGTFPEFITSFGGLKELDLGNNLFTGTITQGLAGISLEKLNLSHNNFSGVLPFFGGESKFGVDAFEGNSPSLCGPPLGSCAGTSTLSSGAVAGIVISLMTGAVVLASLLIGYMQNKKRKGSGESEDELNDEEEDEENNGGGAVGGGGEGKLMLFAGGENLALDDVLNATGQVLEKTCYGTAYKAKLADGGTIALRLLREGSCKDKASCLAVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRSLHDLLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLEVPITHANVRSKNVLVDDFFAARLTDFSLDKLMIPSIADEMVALAKTDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKSGRNGGEYVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSVTPF 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1808 698 Pfam Protein tyrosine and serine/threonine kinase 401 673 IPR001245 GO:0004672|GO:0006468
Aed9g1808 698 Gene3D Ribonuclease Inhibitor 213 311 IPR032675 -
Aed9g1808 698 Pfam Leucine rich repeat 219 277 IPR001611 GO:0005515
Aed9g1808 698 MobiDBLite consensus disorder prediction 348 375 - -
Aed9g1808 698 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Aed9g1808 698 ProSiteProfiles Protein kinase domain profile. 397 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1808 698 Gene3D Ribonuclease Inhibitor 50 212 IPR032675 -
Aed9g1808 698 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 16 698 - -
Aed9g1808 698 SUPERFAMILY Protein kinase-like (PK-like) 401 674 IPR011009 -
Aed9g1808 698 Gene3D Transferase(Phosphotransferase) domain 1 475 686 - -
Aed9g1808 698 MobiDBLite consensus disorder prediction 674 698 - -
Aed9g1808 698 SUPERFAMILY L domain-like 84 283 - -
Aed9g1808 698 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 16 698 - -
Aed9g1808 698 MobiDBLite consensus disorder prediction 679 698 - -
Aed9g1808 698 Gene3D Phosphorylase Kinase; domain 1 388 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1808 Aed-Chr9 21665185 21669728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1808 19 698 Receptor kinase-like Gene Family AT3G24660 72.647 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed9g1808 PK_Tyr_Ser-Thr 9.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1808 - - gmx:100814814 1146.72