Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1802 ATGGAAGATGAGGTAAAGGTAGCCAAAGTTGGAGAAAGCCAGAGAGAAGACTCATCAAGAGTTTTTCCATGTCAGTTCTGTTCAAGAAAGTTTTACAGTTCTCAAGCTTTAGGGGGACACCAAAATGCTCACAAGAAAGAAAGAACAGCTGCAAGGAAGGCCAAGAAAGCTTCTGAGTACTCATGTGTTTCCTTCCCTTCCCCACTGTCAACCCCAATGATTTTTACCCCAACCCATTTTGACATTTCAAATCCTTCAATGTTCATCGCTACCCATGCAGCAAGACTCCCTTATCTCCCAAGCCATCCAATTTCAGAACAATTTGGATTAAATGGTGCACCTAGATTCAGCAATGCACTATTTTATGGGGAAAGTTCAAAACATCGGTTCCATGATGATGCAAAGAGCTCTAACTTCAGTTGGGGGGACACATCTCAACATATACAATTGATAAGTAATAAACAAAATCTTGGAATTTGGAAAAATGGTACAGAGAAAGATCAAAAGCTTGACTTATCTCTCCATTTGTAA 531 0.3992 MEDEVKVAKVGESQREDSSRVFPCQFCSRKFYSSQALGGHQNAHKKERTAARKAKKASEYSCVSFPSPLSTPMIFTPTHFDISNPSMFIATHAARLPYLPSHPISEQFGLNGAPRFSNALFYGESSKHRFHDDAKSSNFSWGDTSQHIQLISNKQNLGIWKNGTEKDQKLDLSLHL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1802 176 Gene3D Classic Zinc Finger 2 65 - -
Aed9g1802 176 ProSiteProfiles Zinc finger C2H2 type domain profile. 22 49 IPR013087 -
Aed9g1802 176 SUPERFAMILY beta-beta-alpha zinc fingers 19 49 IPR036236 -
Aed9g1802 176 ProSitePatterns Zinc finger C2H2 type domain signature. 24 44 IPR013087 -
Aed9g1802 176 Coils Coil 172 176 - -
Aed9g1802 176 PANTHER ZINC FINGER PROTEIN JAGGED 12 176 IPR045320 GO:0003700
Aed9g1802 176 PANTHER PROTEIN LATE FLOWERING 12 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1802 Aed-Chr9 21590808 21591338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1802 18 53 C2H2 Transcription Factor Family AT5G14010 77.778 8.80e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1802 - - gmx:100527084 315.849