Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1800 ATGGCACTAAATAAGAAAGGAAACTTGTTAGGTACCAACACTGGTAAGGATCCTAGCATGTTTCCTAAACCTGCCCAAGCCCAACCAGAATTATCCAGTGGTGTTCCAAATACAGGACGTCATGTGCATAATAATATTGCTATACAGGCAGGGGAAGAATTTTCTGTGAATGTTGGTCATGATGGAATTGCTGCTGGAAGGGTTCCGGTTTCACCTGATATACCTCGACATTGTGAGAATGTGCTTGGGTTGAATAAGGAGAATGGCCATGTGAGATATCAAGATCTTACTAATATTTTGGGGTTGAGGAGAATGGACTCTGAGAGTTCTTCTGATATATCTGACTTTGTCACTTTAAAACAGGCAGCGCAGGAGATGGAAAACAGAGCTTCTGTAAACATTTTAAGGAGAATTCAGAAGGGAGATGGTGTGTTGAGGATGACTGTTCAAGAACCAGTTGGTGACCAGTCTAGTCCTGCTTCGTCTGGATCACCCCTTCTCAGATATGAAGCTTCTCAGTCCAATGGATTTTCTGGCTCAGGAATTGTAGATGATTTTCTGTCTGGGAAAATGAAGTTTCTCTGCAGCTTTGGTGGAAAAATATTACCAAGACCTAGTGATGGGAAACTCAGATATGTAGGGGGAGACACACACATTATATCTATCCGGAAGGATATTTCATGGGCAGAGCTTATGAAGAAGACCTTGGGTATTTGCAATCAACCTCACACAATCAAGTACCAGCTTCCAGGGGAGGATCTTGATGCTCTAATATCTGTTTCCTCTGATGAAGATCTTCAAAATATGAAGGAGGAATACCACGGGCTTGAAAGGCATGAAGGTTCTCAAAAACTTAGAATTTTTTTAGTCCCTTTGGGTGAATCTGAAGAGACTTCATCAACAGAGGTGAGTGCTGTTCAGCAGAGTGATCCTGATTACCAATATGTTGTCGCTGTAAATGGCATGGGAGACCCTACTAGGACAAACATTGGTGGGCAAAGTTTGACAAATGAGGCCAGTCAACTGGGGACAGATTTGAATTTGGTTCCAGTTTTTCCAAAAACTTCAAATGCTTCTTCTCCTTTGGATATCAGGGATGGTATTAATGCTTTAAATCCAGATGGAATTTTGAATGATTCCCTGAATTTGCAAACACCCTTGCCAATTCCTCCCACTCCAATCCAGGTAACAGGTTCTAGCACAGGTTATATACAATTGCTCAGTAACAACTCATGCCAGGGAAGTATTGAGAGTAATGCATCATTTGCAACTGCTCAGCTACATCCTGAATACTCCAATATAAGCACTGCTGATCGCAGATACCCTCAACAAGTGGCTGCTACTTTGTCAAGCAACACCCATCCTTATCAGCAGGGTGATGTTGGTGGGCCCAAGAAGCTCAATGGAGGGCATTTGGACTACAATCCTGGCAATAAATTAGTGACTCCTGTATATGTTAATCCATGTGATGGTTACATTGATGAAGTTTTTAGTGGAAGGTCCTTGCCAAAGGAAAAAAGAGTCTACTCTGAAAATCCTCTTTCACGCTTGGATGATCCAACCTATCAACAGGGTGAATCTTACAGAATTATAGACTCTCCTCATGGGATGTCCCATGCCTTTTCTGATCCACAGTTGCACAAAAATGGAGGAATGTCTGGTTGCTGCTCACAAAATGGATTTGGTCAATCATTCTCCCTTAGCCTTGAAAAGGATCAATTATCTTCAATGTTACTCCCTAGTGTCTCACAGGTGAACTTTATGGAGCATCAGCATGATTCCATTGTCCATCATCCTCAAATGCAAAGTAAGACACCCAAAGTTGAGTCAGCTGAGTCACACAAAGGGCAAGATTTGGCATCTTCTTCTTCATGCTATGAATCATTGGGAATGAATGATCCTTTTCATAAGGATAGCATTTTTACTGAAAAAAAGAACCTTATTTCTCAATCTGACTTGAGTGGACCCAGCTATGTTGCAAAGGATATTCAGGAAAATTCTGTGAAATTAGAAAGGATGCAGATAACTGTAGAAAAGAATCCAATTCTCAAGGATAGCAAGGTTCATGAGGCGAAATCAACTGTCACTGAAATGGGACATGTGACTGAATTGCATCTTTTGGACTCCTTACCTGATAATAACTTCAATGCTAAGATTAATATGCAAAAGAATTGGGAGCTACCTTCTGAGAGTATAGTTACTACTTCATCAGGCATGATGGGCCCCTCTCTAAATAATCTTGTGGGAAAGTCCCCATCTGATAACATGAGCCAAAGGGCTAGTGAGCACAGAAAATATGCTTTGGCTGAAGGTCTGATTGGTGAACAAGGGATTGATTTTTCATTGACCAGAAATTTTGATTTAAATGGTCCAATTTTAAATTGTGAAGTAGTCTCTCGTGACAAAATTTCTGAAGGAGATCATATTTTCAAGCTGTCCATTCACCCAGATTCTCTTAAAGCTGCAGAAATTCATCCTTCTATGAATCAAATGGCTACAGGTTTTCAAGAAAATCCAACTGTAGGCTCTGCAAGTTTGTATCCTGCTGCATTTCTTGATGATCACAGTCCAAGTCCAAAAATGACAATGAATGGACAGGATAATTCAAGCAATATTATGTCTTTTAAAAAGTCACCATCTGTTCTTGATGAATTTATTACTAGCACTGGTCAAATGGTGAATCAGTTTATCCCTGAACACTCTGCCTCTGGAATGTTAAAAGCTGAAGATAAAATTTCAGAACAATCAAATTTTTTAGAAAGGTGTAATGATGCAAATCGAGTGGAGCCATTTGTCTTAGTAGAAGACATGACTGGTGTTGTTTGTCCATATGTTTTGGATAATGTTGGAAGTGTTGTATCCCCGTCTCATACGGAAGCCGAGAGCATCATCCCCGAGTCTGAACCCGAGGATTTTAATGACGATCAAACAGACAAAAATGAATTCCTTTCTGATGCAATGATAGCAGAAATGGAAGCTAGCATTTATGGTTTACAGATAATAAGAAATGCTGATCTTGAAGACCTTACGGAGTTAGGATCGGGTACTTATGGAACTGTTTATCATGGAAAATGGCGGGGAACAGATGTTGCTATAAAGAGAATTAAGAAGAGCTGCTTTGCAGGGAGGTCTTCTGAGCAAGAACGGTTGGCAAAAGATTTCTGGAGAGAGGCACAGATCCTCTCAAATCTTCATCATCCCAATGTGGTTGCATTTTATGGAATAGTACCGGATGGGGCTGGTGGAACCTTAGCAACTGTAACAGAGTATATGGTTAATGGGTCCCTTAGGCATGTCCTTGTAAAGAACAACAGATTACTAGATCGTCGTAAAAAGCTGATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAAAATATTGTCCATTTTGATTTGAAATGTGACAATTTACTTGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTTGTATCTGGAGGTGTGCGAGGAACCCTTCCATGGATGGCACCGGAGCTGTTGAATGGGAATAGCAGTCGGGTTTCTGAAAAGGTTGACGTTTTCTCATTTGGCATCTCAATGTGGGAGCTATTGACAGGAGAGGAACCTTATGCAGATATGCATTGTGGTGCCATTATTGGGGGTATTGTAAAGAACACTCTTAGACCTCCTGTGCCCGAACGGTGTGATTCTGAATGGAGGAGGCTTATGGAAGAGTGTTGGTCACCTGACCCTGAACACCGGCCATCATTCACAGAGATAACTAGCAAGTTAAGATCTATGTCTATGGCCCTTCAATCAAAAGGGAATCATCAGGCATATCAGTTAAGACCAGGTGGTTCTTGA 3879 0.4091 MALNKKGNLLGTNTGKDPSMFPKPAQAQPELSSGVPNTGRHVHNNIAIQAGEEFSVNVGHDGIAAGRVPVSPDIPRHCENVLGLNKENGHVRYQDLTNILGLRRMDSESSSDISDFVTLKQAAQEMENRASVNILRRIQKGDGVLRMTVQEPVGDQSSPASSGSPLLRYEASQSNGFSGSGIVDDFLSGKMKFLCSFGGKILPRPSDGKLRYVGGDTHIISIRKDISWAELMKKTLGICNQPHTIKYQLPGEDLDALISVSSDEDLQNMKEEYHGLERHEGSQKLRIFLVPLGESEETSSTEVSAVQQSDPDYQYVVAVNGMGDPTRTNIGGQSLTNEASQLGTDLNLVPVFPKTSNASSPLDIRDGINALNPDGILNDSLNLQTPLPIPPTPIQVTGSSTGYIQLLSNNSCQGSIESNASFATAQLHPEYSNISTADRRYPQQVAATLSSNTHPYQQGDVGGPKKLNGGHLDYNPGNKLVTPVYVNPCDGYIDEVFSGRSLPKEKRVYSENPLSRLDDPTYQQGESYRIIDSPHGMSHAFSDPQLHKNGGMSGCCSQNGFGQSFSLSLEKDQLSSMLLPSVSQVNFMEHQHDSIVHHPQMQSKTPKVESAESHKGQDLASSSSCYESLGMNDPFHKDSIFTEKKNLISQSDLSGPSYVAKDIQENSVKLERMQITVEKNPILKDSKVHEAKSTVTEMGHVTELHLLDSLPDNNFNAKINMQKNWELPSESIVTTSSGMMGPSLNNLVGKSPSDNMSQRASEHRKYALAEGLIGEQGIDFSLTRNFDLNGPILNCEVVSRDKISEGDHIFKLSIHPDSLKAAEIHPSMNQMATGFQENPTVGSASLYPAAFLDDHSPSPKMTMNGQDNSSNIMSFKKSPSVLDEFITSTGQMVNQFIPEHSASGMLKAEDKISEQSNFLERCNDANRVEPFVLVEDMTGVVCPYVLDNVGSVVSPSHTEAESIIPESEPEDFNDDQTDKNEFLSDAMIAEMEASIYGLQIIRNADLEDLTELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLAKDFWREAQILSNLHHPNVVAFYGIVPDGAGGTLATVTEYMVNGSLRHVLVKNNRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPVPERCDSEWRRLMEECWSPDPEHRPSFTEITSKLRSMSMALQSKGNHQAYQLRPGGS 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1800 1292 MobiDBLite consensus disorder prediction 1 37 - -
Aed9g1800 1292 Pfam Protein tyrosine and serine/threonine kinase 1009 1269 IPR001245 GO:0004672|GO:0006468
Aed9g1800 1292 MobiDBLite consensus disorder prediction 597 618 - -
Aed9g1800 1292 CDD PB1_UP2 194 289 - -
Aed9g1800 1292 CDD STKc_MAP3K-like 1012 1269 - -
Aed9g1800 1292 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 106 1285 - -
Aed9g1800 1292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1131 1143 IPR008271 GO:0004672|GO:0006468
Aed9g1800 1292 SMART serkin_6 1006 1275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1800 1292 Gene3D - 209 291 - -
Aed9g1800 1292 PRINTS Tyrosine kinase catalytic domain signature 1088 1101 IPR001245 GO:0004672|GO:0006468
Aed9g1800 1292 PRINTS Tyrosine kinase catalytic domain signature 1125 1143 IPR001245 GO:0004672|GO:0006468
Aed9g1800 1292 PRINTS Tyrosine kinase catalytic domain signature 1196 1218 IPR001245 GO:0004672|GO:0006468
Aed9g1800 1292 PRINTS Tyrosine kinase catalytic domain signature 1240 1262 IPR001245 GO:0004672|GO:0006468
Aed9g1800 1292 SUPERFAMILY Protein kinase-like (PK-like) 994 1267 IPR011009 -
Aed9g1800 1292 SMART PB1_new 205 292 IPR000270 GO:0005515
Aed9g1800 1292 SUPERFAMILY CAD & PB1 domains 206 296 - -
Aed9g1800 1292 Pfam PB1 domain 207 291 IPR000270 GO:0005515
Aed9g1800 1292 Gene3D Transferase(Phosphotransferase) domain 1 1094 1288 - -
Aed9g1800 1292 ProSiteProfiles Protein kinase domain profile. 1006 1285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1800 1292 PANTHER SERINE-THREONINE PROTEIN KINASE 106 1285 - -
Aed9g1800 1292 Gene3D Phosphorylase Kinase; domain 1 999 1093 - -
Aed9g1800 1292 ProSitePatterns Protein kinases ATP-binding region signature. 1012 1037 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1800 Aed-Chr9 21573495 21582882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1800 187 445 MAP Kinase Kinase Kinase AT1G16270 43.123 3.23e-45 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Aed9g1800 PK_Tyr_Ser-Thr 5.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1800 - - gmx:100790135 2191.39