Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1729 ATGGGTAAGATTGAACTAGTAGAGAAAGTTGTAATTGTTCCTGAGCAACCAACACCGCACAAGAGAATGTTCTTGTCAAACATTGACCTGTCCCTTGTTGTTTACCAAGACTCAGCCTCATTTTTTGACCCTCCAAGCACCCAAATGAGCTTTGATGAGATTTGTTGCAAACTGTACAGTGCACTTAGCAAGATGCTTGTGCTGTATGATTTCATGGCTGGAAGGCTTGTGCCGAGTTTAGAGGAGACTCATCGGTTCGAAATAGACTGCAATGGTGCTGGTGTTGTTGTTGTGGCAGCAAGGACTGAGAGAAAATTGTGTGAGTTTGGTGTTATTTCTGTACCTAATCCTGAGTTGAGGGATTTGGTTGTTTTCTTGCATGATGAGGGTGGATTAGAAACTGACCTGAAAGATAAGCCCCTTGCATCCTTGCAGCTGACTCAGTTTGGTTGTGGAAGTTTGGCACTGGCTTCTCACTACAACCACTGCACACTGGACGGATTCTCAATCAGAGATTTTGAGGTAAACTTAGGAGCATTAACACGCGGTGAAGATCTCATCATACTACCAAATCCAGATAGAACACTTCTGAGAGCTAGAAACCCTCCAAAGATAAACCATCCACATTTCGAGTACTCAAAAACCACAGACACACACTTGTTCACTCTCCGTGGCAAAAGTGCCACCACAACACAACCCGTGCCAGAAAAAAATCAAATCCAAGTGCTTCACTTGTCACCACAAAAAATAGCCTCCTTCAAAAACAAAACCCCAATGAAGGACAACAACAGCACCACCACAACTTTTCATGTTGTTGCTGCAAAGATATGGAAGGCAAGAAGCATTGCAACCAACATGGCACATGAAAAAGTGTCCACAATGCTGTTCCCAGTGGATGTGCAAGGAGGGGTTGAGAGGTTGGATGATGAGTACATCAAGTCGGGTTTGGATTGGTTAGAATTGAACAAAGGGGCACCTTGCATGGAGGATAGTTTCTCATTGGTGGCATGGTGGAGATTAGGGTTAGAGGAGCAGCTTTTTGCATGGGGGAGGTTAAAGTGTGCCACCCCTCTTGCTGCTAAGCCTGGTTTGGTGATGCTGCTGCCAGGGCCACCAGATCAAGGGGGTCTTAATATATGTTTGGATTTGCCTGAGGATCAAATGCAGGAGTTTAGTAGGATTATGCTAGAAACTTGA 1197 0.447 MGKIELVEKVVIVPEQPTPHKRMFLSNIDLSLVVYQDSASFFDPPSTQMSFDEICCKLYSALSKMLVLYDFMAGRLVPSLEETHRFEIDCNGAGVVVVAARTERKLCEFGVISVPNPELRDLVVFLHDEGGLETDLKDKPLASLQLTQFGCGSLALASHYNHCTLDGFSIRDFEVNLGALTRGEDLIILPNPDRTLLRARNPPKINHPHFEYSKTTDTHLFTLRGKSATTTQPVPEKNQIQVLHLSPQKIASFKNKTPMKDNNSTTTTFHVVAAKIWKARSIATNMAHEKVSTMLFPVDVQGGVERLDDEYIKSGLDWLELNKGAPCMEDSFSLVAWWRLGLEEQLFAWGRLKCATPLAAKPGLVMLLPGPPDQGGLNICLDLPEDQMQEFSRIMLET 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1729 398 Gene3D - 2 214 IPR023213 -
Aed9g1729 398 Pfam Transferase family 307 392 - -
Aed9g1729 398 Pfam Transferase family 3 304 - -
Aed9g1729 398 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 301 - -
Aed9g1729 398 Gene3D - 224 302 IPR023213 -
Aed9g1729 398 Gene3D - 303 397 IPR023213 -
Aed9g1729 398 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 3 301 - -
Aed9g1729 398 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 300 397 - -
Aed9g1729 398 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 300 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1729 Aed-Chr9 20725285 20727628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1729 3 397 Monolignol Biosynthesis Gene Families AT5G48930 27.354 3.92e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1729 K15400 - gmx:100801822 645.966