Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1691 ATGGAAGAAGACTTCGACCTCCCCGGCGGCGACGAGGAAATGGATCTCGGCGAAGACAAGGTCGGCGAGGAGCGCGAGATCGGCTCCCGCGGCCTCAAGAAGAAGCTCCTCAAGGAAGGTCAAGCCTGGGAAACCCCCGAAGTCGGCGACGAAGTCCAAGTTCATTACACGGGAACTTTGCTGGATGGAACTAAGTTCGATTCGAGCCGCGACAGGGATTCTCCCTTCAGCTTCACGCTCGGACAAGGTTTGCGTTTGCGCTCGCTGAACGTTGGAAAACTAAGCAATTGTTTGTTTTGTGTTGCTTCTGAGAGTAGGCAAGTAATTAAAGGATGGGATGAAGGTATTAAAACCATGAAGAAAGGTGAAAATGCTATTTTCACCATCCCTCCTGAGCTAGCTTATGGTGAATCTGGTTCCCCTCCAACGATTCCTCCTAATGCTACACTCCAATTTGACGTTGAGCTTTTGTCATGGACCAGTGTAAAGGACATATGCAAGGATGGTGGTATATTTAAAAAGATACTCACTGAGGGGGAGAAGTGGGAGAACCCTAAGGATCCTGATGAAGTACTGGTTAAGTATGAAGCTCATCTAGAAAATGGAAATGTTGTATCAAAGTCTGATGGAGCCGAGTTCACAGTCAGAGAGGTATCTGGAGTTAATGTGACAGGTCATTATTGTCCTGCATTGTCAAAGGCTGTTAAAACCATGAAGAAAGGAGAGAAAGTGCTTTTGACAGTTAAGCCACAATGTAAGTTGTCTAAGTGCCCAGAATGTTTTGATGGATTTGGTGAGAAGGGAAAGCCAGCACAAGGTGATGAAGGTGCAGTTCCATCAAATGCAACATTGCAGATTACTCTTGAATTAGTTTCATGGAAAACTGTTTCAGAAGTGACCGAGGACAAGAAGGTCATAAAGAAGATCCTCAAGGAAGGGGAAGGATATGAGCGTCCAAATGAGGGGGCCATTGTTCAAGTGAAACTAATTGGTACGCTACAAGATGGTACTGCTTTTTTGAAGAAGGGCCATGATGAAGAAGAGAAGCTGTTTGAATTCAAAACAGATGAGGAACAAGTTGTCGATGGACTTGATAGAGCTGTATTGACTATGAAGAAGGGTGAGGCTGCATTGTTGACCATTGCACCTGAGTATGCTTTCGGTTCATCAGAATCCCAGCAGGAGTTGGCTGTAGTTCCTCCTAACTCAACTGTGTATTTTGAAGTTGAGCTAGTGTCATTTGAGAAAGAGAAGGAGTCCTGGGATCTGAACACTGAAGAAAAAATTGAAGCTGCTGGTAAGAAGAAAGAGGAAGGAAATGTGTTGTTTAAAGCTGGTAAATATGCAAGAGCTTCCAAAAGATATGAAAAGGCTGTGAAGTACGTAGAATATGATTCCTCCTTCAGTGAGGAGGAGAAAAAGCAGGCCAAGACCTTGAAGGTTGCCTGCAATCTGAACAATGCTGCTTGCAAGTTGAAGTTAAAAGACCACAAAGAAGCAGAGAAGTTGTGTACTAAGGTGTTGGACCTTGAGAGTACAAACGTGAAAGCCCTCTATAGAAGGGCCCAAGCATTTATGCAGTTGGGTGACTTGGATTTGGCTGAACTTGACATTAAAAAAGCTCTTGAGATTGATCCTAACAACAGGGAGGTCAAATTGGAGTACAGGACTTTGAAGGAAAAGGTGAAAGAGAGTAATAGAAAGGAGGCGCAATTTTATGGAAATATGATCAACAAGATGACAAAGATTGAATCCGTGGGTATTGACAACGAAATCTAA 1779 0.4384 MEEDFDLPGGDEEMDLGEDKVGEEREIGSRGLKKKLLKEGQAWETPEVGDEVQVHYTGTLLDGTKFDSSRDRDSPFSFTLGQGLRLRSLNVGKLSNCLFCVASESRQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKKILTEGEKWENPKDPDEVLVKYEAHLENGNVVSKSDGAEFTVREVSGVNVTGHYCPALSKAVKTMKKGEKVLLTVKPQCKLSKCPECFDGFGEKGKPAQGDEGAVPSNATLQITLELVSWKTVSEVTEDKKVIKKILKEGEGYERPNEGAIVQVKLIGTLQDGTAFLKKGHDEEEKLFEFKTDEEQVVDGLDRAVLTMKKGEAALLTIAPEYAFGSSESQQELAVVPPNSTVYFEVELVSFEKEKESWDLNTEEKIEAAGKKKEEGNVLFKAGKYARASKRYEKAVKYVEYDSSFSEEEKKQAKTLKVACNLNNAACKLKLKDHKEAEKLCTKVLDLESTNVKALYRRAQAFMQLGDLDLAELDIKKALEIDPNNREVKLEYRTLKEKVKESNRKEAQFYGNMINKMTKIESVGIDNEI 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1691 592 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 87 - -
Aed9g1691 592 SUPERFAMILY FKBP-like 298 432 - -
Aed9g1691 592 Coils Coil 548 568 - -
Aed9g1691 592 PANTHER PEPTIDYLPROLYL ISOMERASE 106 301 - -
Aed9g1691 592 PANTHER PEPTIDYLPROLYL ISOMERASE 303 414 - -
Aed9g1691 592 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 316 412 IPR001179 GO:0003755
Aed9g1691 592 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 183 290 IPR001179 GO:0003755
Aed9g1691 592 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 44 157 IPR001179 GO:0003755
Aed9g1691 592 SMART tpr_5 432 465 IPR019734 GO:0005515
Aed9g1691 592 SMART tpr_5 481 514 IPR019734 GO:0005515
Aed9g1691 592 SMART tpr_5 515 548 IPR019734 GO:0005515
Aed9g1691 592 MobiDBLite consensus disorder prediction 1 28 - -
Aed9g1691 592 Gene3D - 25 163 IPR046357 GO:0003755
Aed9g1691 592 Gene3D - 295 416 IPR046357 GO:0003755
Aed9g1691 592 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 322 415 IPR001179 GO:0003755
Aed9g1691 592 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 160 IPR001179 GO:0003755
Aed9g1691 592 Gene3D Tetratricopeptide repeat domain 418 575 IPR011990 GO:0005515
Aed9g1691 592 MobiDBLite consensus disorder prediction 1 19 - -
Aed9g1691 592 Pfam Tetratricopeptide repeat 515 548 IPR001440 GO:0005515
Aed9g1691 592 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 188 294 IPR001179 GO:0003755
Aed9g1691 592 SUPERFAMILY FKBP-like 164 297 - -
Aed9g1691 592 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 303 414 - -
Aed9g1691 592 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 106 301 - -
Aed9g1691 592 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 415 585 - -
Aed9g1691 592 PANTHER PEPTIDYLPROLYL ISOMERASE 415 585 - -
Aed9g1691 592 PANTHER PEPTIDYLPROLYL ISOMERASE 1 87 - -
Aed9g1691 592 SUPERFAMILY TPR-like 421 579 IPR011990 GO:0005515
Aed9g1691 592 SUPERFAMILY FKBP-like 23 169 - -
Aed9g1691 592 Gene3D - 164 294 IPR046357 GO:0003755
Aed9g1691 592 ProSiteProfiles TPR repeat profile. 515 548 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1691 Aed-Chr9 20394761 20399565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1691 20 583 Calmodulin-binding Proteins AT3G25230 75.709 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1691 K09571 - gmx:100812632 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1691 9 20394761 20399565 Aed2g1556 2 19261497 19264224 PCT