Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1690 ATGGCTGATACAGGTGGAAGAGGAGATGCAGCTACAGTGAGACCGGTGGTAGTGTGTGATAACAAGTGTGGCTGCACGGTTCCATGCACTGGTGGTTCCACTTGCAGGTGCACAAGCGGCGGTGGCGGCGGAAGCGCGGCGAGAGGAGGTGGTGATCACGTGACATGCTCGTGCGGGGAGCACTGTGAGTGCAATCCATGCTCATGTCCCAAGACTGCTGCTGCTGCCGGAAGTGGTTGCAGATGTGGCGCGGATTGCGCATGTATTTCTAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCATGGAGAAAGAAGAGAAAGTATGAGCTTGGGCGCCAGGCAGCAAACACCAAGTTATCAGGCAACAAGACTATCCGGAGGATTCGTGTTAGAGGTGGCAATGTAAAATGGAGAGCATTGAGGTTGGATACCGGCAATTACTCATGGGGTAGTGAAGCAGTAACTCGCAAGACTCGTGTTCTAGATGTTGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAAACCCTGGTCAAGAGTGCTATTGTTCAAGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGAAATTGGTAGAAGGAAGAAAGTAGCATCCAAGAAGGACTCTGCTGAGGAGGGTGAAGCTGTTGCTGCTGAAGAAACTAAGAAAAGTAACCATGTGCAGAGAAAAATTGAGAATCGCCAGAAAGAGCGTAACCTTGATTCCCATATTGAAGAGCAATTTGGTGGTGGTCGATTGTTGGCCTGTATTTCTTCTCGCCCCGGCCAATGTGGCAGGGCTGATGGGTACATTCTGGAAGGTAAGGAACTTGAATTTTACATGAAGAAACTTCAGAAGAAGAAGGGAAAGGGTGCTGCTTAA 915 0.4962 MADTGGRGDAATVRPVVVCDNKCGCTVPCTGGSTCRCTSGGGGGSAARGGGDHVTCSCGEHCECNPCSCPKTAAAAGSGCRCGADCACISRDSMHKRRATGGKKKAWRKKRKYELGRQAANTKLSGNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRRKKVASKKDSAEEGEAVAAEETKKSNHVQRKIENRQKERNLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1690 304 Gene3D - 118 248 - -
Aed9g1690 304 Gene3D - 249 301 - -
Aed9g1690 304 PANTHER 40S RIBOSOMAL PROTEIN S8 88 304 - -
Aed9g1690 304 TIGRFAM eS8: ribosomal protein eS8 89 285 IPR001047 GO:0003735|GO:0005840|GO:0006412
Aed9g1690 304 PANTHER 40S RIBOSOMAL PROTEIN S8 88 304 IPR001047 GO:0003735|GO:0005840|GO:0006412
Aed9g1690 304 ProSitePatterns Ribosomal protein S8e signature. 97 116 IPR018283 GO:0003735|GO:0005840|GO:0006412
Aed9g1690 304 CDD Ribosomal_S8e_like 91 283 - -
Aed9g1690 304 MobiDBLite consensus disorder prediction 217 241 - -
Aed9g1690 304 Pfam Plant PEC family metallothionein 19 90 IPR000316 GO:0008270
Aed9g1690 304 Pfam Ribosomal protein S8e 91 283 IPR022309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1690 Aed-Chr9 20388165 20394148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1690 89 292 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.333 1.60e-123 350