Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed9g1645 | ATGGGTCTATTGGGTTTGGGTCAATTTTCATGCATGCCGATGGCAAAGATTTGTACCATTGGGGCTGTTGGGGAAGGCTTGGCCACCCCTCTAGTGTTGGTTATAAGTAGCCGCATGATGAATAACATTGGTGGCTCCTCTTCCATGGATGCAAACACTTTCATCCATAACATCAATAAGAATGCAGTGGCTTGGTTATATTTGGCTGGTGCCTCTTTTGCGGTTTGCTTCCTTGAGGGTTTTTGTTGGACAAGAACGAGCGAAAGACAAGCAGTCAGAATGAGATGCAGGTATCTGAAAGCAGTGCTCAGACAAGATGTGGCTTATTTCGATCTGCATGTCACAAGCACGTCGGAGATTATCACCAGCGTCTCCAGCGACAGCCTCGTGATCCAAGATGTTCTCAGCGAAAAAGTGCCGAATTTCTTGATGAACATTTCTTTGTTCCTTGGGAGCTACATAGCCGCGTTTGCAATGCTGTGGAGGCTGGCCATCGTCGGGTTTCCGTTCGTGGTTCTTCTGGTGATCCCGGGCTTGATCTACGGCAAGACTCTGATGGGACTGTGTAGTAAAATCCGGGAGGAGTATAACCAAGCCGGGGCGGTGGCGGAACAAACTGTTTCGTCCATCAGAATCGTTTATTCGTTCGTGGGGGAGAGCAAGACCATGAGCGCTTTCTCAAACGCGCTTCAAGGGACGGTTAAGCTTGGCCTGAAACAAGGCTGGGCTAAGGGATTGGCCATTGGAAGCAACGGCGTCGTTTTCGGCATTTGGTCCTTCATGTGCTATTACGGTAGCAGACTCGTCATTTATCATGGCGCCAAAGGTGGGACGGTTTTCGCCGTCGGAGCAGCCATCGCGGTTGGTGGATTAGCATTAGGGGCGGGTTTATCCAACATGAAGTACTTCATGGAGGCGGGGGCGGCGGCGGAGCGTATAAAGGAAGTGATAAAGAGGGTTCCCAAGATAGATTCCGAGAGCATCGACGGCGAAATCCCAGAGACAGTCCACGGGGAAGTGGAATTTGACAGAGTGAAATTCGCATACCCATCGAGACCGGAGAGCGCAATTCTAAATGGTCTGAGCCTGAAGATTGCCGCGGGAAAGAGGGTGGCACTGGTGGGGGAAAGTGGGTCTGGGAAATCGACACTGATAGCACTGCTGCAGAGGTTCTACGACCCTTCCGGGGGAGAGGTACGGTTGGACGGAGTGGGGATCCAGAGACTGCAGGTGAAGTGGGTTCGGTCTCAAATGGGGTTGGTGAGTCAAGAGCCTGCTCTGTTCGCGACCAGCATTAAAGAAAACATACTTTTCGGCAAAGAAGATGCCACGGAAGAGCAGGTGATTGAGGCCGCAAAAGCTGCCCATGCTCATAACTTCATCCAGCTTCTGCCTCAAGGTTACCATACACAGGTGGGGGAGAGGGGGATTCAGATGTCAGGGGGACAAAAACAGAGGATAGCAATTGCGAGGGCAATAATTAAGAAACCGCGAATCCTCCTTCTGGACGAAGCAACAAGCGCCCTCGACTCAGAGTCAGAGCGACTCGTCCAAGAAGCATTGGACAACGCCACCGCGGGCTGCACCACCATCATCGTCGCGCACCGCCTATCCACCATCCAGAACGCCGACCTCATCGCCGTTGTTGGAGGCGGAAGAATCGTCGAAATGGGCTCGCATGACGAGCTCATCCGAAACGACACCGGCGCCTACGCGTCGGCCTTCCACCTCCAGCAACAACAGAAGGTGAAAGAAAGCACAACAACAAAGACCGTTACTCTAGAGAGTAGTGCTTCCTGCACTACATCAATCACCATCGAAAATAACGTGAGGTCCACTCAGGTAGGCCCCACGATATTCGGTGACGGTGATGATGAAAATAACATTGGAGAGAAAAATATAATGAAGGTACATGCGCCGCCGTCGTTTAGGAGGCTGGTGGCGTTGAGTTTGCCGGAGTGGAAGCACGTCCTGTTAGGGTGCTGGAACGCGATGGTGTTCGGCGCGGTTCAGCCGGTGTACGCCTTCACGATGGGGTCGACGATACTGTTGTATTTTCATGCGGATCACGAGGAGATAGAGAGGCGAACGAAGTTCTACTCGTTCGCCTTTCTGGGACTTTTCGTGGTGTCTCTGCTGGCGAATATTGGGCAGCATTATTGCTTCGGGTACATGGGGGAATACTTGACGAAACGGGTCAGAGAGACAATGCTTGCAAAAATCCTCACTTTCGAAGTTGGGTGGTTCGATTTGGAACAGAACTCCAGTGCCGCCATCTGCTCCAGACTTGCCAAGGATGCTGATGTGGTGAGGTCTCTAGTGGGAGATAGAATGGCATTGCTAGTACAAACATTTTCAGCGGTGATAACAGCCTACACGATGGGCCTAATCATTTCCTGGAGGCTTTCAATTGTTATGATCGCCGTACAACCCATCATCATAGCGTGCTTCTACACAAGGCGTGTTCTTCTCAAGAGCATGTCCCACAAGGCCCTCAAGGCCCAGCAGAAAAGCAGCAGCATAGCTTCCGAAGCGGTTTCGAATGTTAGGACCGTAACGTCCTTTTCTTCCCAGGCCCGGATCCTCAGGCTGCTCGAAGAGGCCCAGGAGGGCCCTAGCCGCGAGAATGTCCGGCAATCATGGTTTGCCGGCATTGGACTCGGGTGCTCCCAGGGCCTCGCGTCCTGCATCTGGGCCTTGGACTTTTGGTACGGCGGTAAGCTGATCTACGGTGGGTACATAACCGTCAAAACTTTTTTCGAGAGCTTCATGGTTTTGGTGAGCACGGGGAGGATCATCGCCGACGCGGGAAGCATGACCACGGATCTCGCAAGAGGTGCTGATGTTGTTGGTGATGTTTTCGGGATCATAGACAGGTGCACGGAAATTGAACCCGATGACCCGAATGGGTACAAGGCAGAGAGTTTAGTTGGTGACATAGAGTTTCATGAAGTGCATTTTGCGTACCCCACTAGGCCTAATGTGGCTATCTTCTCAGGTTTCTCTATTAATATTAAGTCAGGTCAATCAACAGCATTGGTGGGGCAGAGTGGGTCAGGGAAATCGACCATCATAGGGCTAATAGAGAGATTTTATGATCCACTTCAGGGGATGGTGACAATAGATGGCATGGACATAAAACGTTACAACCTAAAGTCACTAAGGAAGCACATAGCACTAGTGAGCCAAGAGCCAACGTTGTTCGGTGGGACCATAAGGGAGAACATTGCATACGGAACTGCAACATGCGATGGTGATGATGCCGACGAGAGTGAGATTATAGCGGCGGCGAGAGCGGCGAACGCTCACGATTTCATAGCGGGCATGAAGGATGGTTACGAGACATTGTGTGGGGAAAAGGGGGTGCAGCTTTCGGGGGGTCAGAAGCAGAGGATAGCAATAGCGAGGGCAATATTGAGAAATCCAAAGGTGTTGCTGTTGGACGAGGCTACGAGTGCGTTGGATGGTCAAACGGAGAAGGTGGTGCAGGAAACGTTGATGAGGGTGATGGCTGGGAGGACCAGCGTGGTGGTGGCGCATAGGTTGAGCACCATTCACAATTGTGATGTTGTTGCTGTGTTGGAAAAGGGGAGGGTGGTGGAGATTGGAACCCACTCGTCTTTGTTGGCCAAAGGAGCATCGTGTGGTGGAGCTTATTACTCCTTGGTCACTCTTCAGACCAGACATGCACCAGCTGCTAACACCAAATCATAA | 3714 | 0.5167 | MGLLGLGQFSCMPMAKICTIGAVGEGLATPLVLVISSRMMNNIGGSSSMDANTFIHNINKNAVAWLYLAGASFAVCFLEGFCWTRTSERQAVRMRCRYLKAVLRQDVAYFDLHVTSTSEIITSVSSDSLVIQDVLSEKVPNFLMNISLFLGSYIAAFAMLWRLAIVGFPFVVLLVIPGLIYGKTLMGLCSKIREEYNQAGAVAEQTVSSIRIVYSFVGESKTMSAFSNALQGTVKLGLKQGWAKGLAIGSNGVVFGIWSFMCYYGSRLVIYHGAKGGTVFAVGAAIAVGGLALGAGLSNMKYFMEAGAAAERIKEVIKRVPKIDSESIDGEIPETVHGEVEFDRVKFAYPSRPESAILNGLSLKIAAGKRVALVGESGSGKSTLIALLQRFYDPSGGEVRLDGVGIQRLQVKWVRSQMGLVSQEPALFATSIKENILFGKEDATEEQVIEAAKAAHAHNFIQLLPQGYHTQVGERGIQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERLVQEALDNATAGCTTIIVAHRLSTIQNADLIAVVGGGRIVEMGSHDELIRNDTGAYASAFHLQQQQKVKESTTTKTVTLESSASCTTSITIENNVRSTQVGPTIFGDGDDENNIGEKNIMKVHAPPSFRRLVALSLPEWKHVLLGCWNAMVFGAVQPVYAFTMGSTILLYFHADHEEIERRTKFYSFAFLGLFVVSLLANIGQHYCFGYMGEYLTKRVRETMLAKILTFEVGWFDLEQNSSAAICSRLAKDADVVRSLVGDRMALLVQTFSAVITAYTMGLIISWRLSIVMIAVQPIIIACFYTRRVLLKSMSHKALKAQQKSSSIASEAVSNVRTVTSFSSQARILRLLEEAQEGPSRENVRQSWFAGIGLGCSQGLASCIWALDFWYGGKLIYGGYITVKTFFESFMVLVSTGRIIADAGSMTTDLARGADVVGDVFGIIDRCTEIEPDDPNGYKAESLVGDIEFHEVHFAYPTRPNVAIFSGFSINIKSGQSTALVGQSGSGKSTIIGLIERFYDPLQGMVTIDGMDIKRYNLKSLRKHIALVSQEPTLFGGTIRENIAYGTATCDGDDADESEIIAAARAANAHDFIAGMKDGYETLCGEKGVQLSGGQKQRIAIARAILRNPKVLLLDEATSALDGQTEKVVQETLMRVMAGRTSVVVAHRLSTIHNCDVVAVLEKGRVVEIGTHSSLLAKGASCGGAYYSLVTLQTRHAPAANTKS | 1237 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed9g1645 | 1237 | Gene3D | ABC transporter type 1, transmembrane domain | 625 | 983 | IPR036640 | GO:0005524|GO:0016021 | |
Aed9g1645 | 1237 | ProSitePatterns | ABC transporters family signature. | 1124 | 1138 | IPR017871 | GO:0005524 | |
Aed9g1645 | 1237 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 17 | 305 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aed9g1645 | 1237 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 970 | 1226 | IPR027417 | - | |
Aed9g1645 | 1237 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 16 | 1230 | IPR039421 | - | |
Aed9g1645 | 1237 | SMART | AAA_5 | 1007 | 1206 | IPR003593 | - | |
Aed9g1645 | 1237 | SMART | AAA_5 | 367 | 561 | IPR003593 | - | |
Aed9g1645 | 1237 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 17 | 313 | - | - | |
Aed9g1645 | 1237 | CDD | ABC_MTABC3_MDL1_MDL2 | 980 | 1226 | - | - | |
Aed9g1645 | 1237 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 980 | 1221 | IPR003439 | GO:0005524 | |
Aed9g1645 | 1237 | Pfam | ABC transporter | 1000 | 1152 | IPR003439 | GO:0005524 | |
Aed9g1645 | 1237 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 664 | 945 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aed9g1645 | 1237 | Pfam | ABC transporter | 358 | 507 | IPR003439 | GO:0005524 | |
Aed9g1645 | 1237 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 648 | 963 | - | - | |
Aed9g1645 | 1237 | PANTHER | ABC TRANSPORTER B FAMILY PROTEIN | 16 | 1230 | - | - | |
Aed9g1645 | 1237 | Pfam | ABC transporter transmembrane region | 17 | 282 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aed9g1645 | 1237 | Pfam | ABC transporter transmembrane region | 664 | 928 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aed9g1645 | 1237 | Gene3D | - | 984 | 1230 | IPR027417 | - | |
Aed9g1645 | 1237 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 333 | 578 | IPR027417 | - | |
Aed9g1645 | 1237 | Gene3D | - | 330 | 579 | IPR027417 | - | |
Aed9g1645 | 1237 | SUPERFAMILY | ABC transporter transmembrane region | 17 | 324 | IPR036640 | GO:0005524|GO:0016021 | |
Aed9g1645 | 1237 | SUPERFAMILY | ABC transporter transmembrane region | 641 | 965 | IPR036640 | GO:0005524|GO:0016021 | |
Aed9g1645 | 1237 | CDD | ABC_MTABC3_MDL1_MDL2 | 340 | 578 | - | - | |
Aed9g1645 | 1237 | Gene3D | ABC transporter type 1, transmembrane domain | 17 | 603 | IPR036640 | GO:0005524|GO:0016021 | |
Aed9g1645 | 1237 | ProSitePatterns | ABC transporters family signature. | 479 | 493 | IPR017871 | GO:0005524 | |
Aed9g1645 | 1237 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 340 | 576 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed9g1645 | Aed-Chr9 | 19887901 | 19895082 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed9g1645 | 17 | 1226 | Calmodulin-binding Proteins | AT2G36910 | 43.893 | 0.0 | 979 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed9g1645 | K05658 | - | gmx:100809399 | 1936.38 |