Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1622 ATGCAGTTCAATCGCCTCTGCGTAGTTTTGCCACCAAATTCTGGTGAAATGGTGGTGCCACTTGAAAAGGGTGTCAAACAACAAGAACCCTTTGAAACACCAGAGAAACAAGTTGTTGAGGCCACACAAAAGAAACCTCAAAGGGCTTGTGGTGGACAAGTTCTTGATTTTCTTCGCGATTCTTTGGCCAAGTTATATGACTCAAGGTGGTTGAGAATTTGCCACAAAGGGAACAACAACAGCAACAGCTCTGGTGTGTTGTTTCATGACATGGATGGTGTGCAAGTTTCTGTCAACATAGGCAGGGACAACCCCAGAATCTTCAGCTATGCAGAACTTTTCATAGGGTCCAATGGTTTCAGCAAAGACCAAGTTCTAGGGAGTGGAGGCTTTGGCAGAGTCTACAAGGCCGTTTTGCCGAGTGATGGAACCGTTGTAGCTGTGAAGTGCTGTCTGGCAGAGAAAGGGAAGCAGTTTGAGAAGAGTTTTGCAGCAGAGTTAACAGCCGTGGCTGATCTTCGCCACAAGAATCTTGTGAGGCTGAGGGGTTGGTGTGTGAATGATGATCAGTTGCACCTTGTTTATGACTACATGCCTAACCGAAGCCTTGACCGTTTACTGTTTCGAAGGCACGAGGGATTGAGGGGTGAGCCTCTTCAATGGGGACAAAGAGGGAAGATTGTGAAAGGTTTGGCTGCAGCATTGTACTATCTACATGAGCAGCTAGAGACTCAAATCATTCATAGGGATGTTAAGACCAGCAATGTGATGCTTGATTCTCATTACAATGCTAGGTTGGGTGACTTTGGCATGGCAAGGTGGTTGGAACATGAGCTTGAGTTTGAGTATGATTATAACAAGAGGAAAACAATAGCAACCAAAAGTGGCCATTTCAGGTTGGGAGAGACTTCAAGAATTGGTGGCACAATTGGGTATCTTCCACCTGAAAGCTTGCAGAAACCAAGCAATGCTACTTCAAAATCTGATGTCTTCAGTTTTGGCATTGTTGTGCTGGAGGTGGTGTCTGGAAGGAGAGCAATTAGTCTCACACACCCAGATGAACAGATCATCTTGCTTGACTGGATTAGAAGGCTTTCTGATGAAGGGAAGCTTCTTGAAGCTGCGGATACTCGGTTACCGGATGATGGATCCTACAGGCTTTCAGAGATGCAGCATTTCATTCACATAGGCCTACTATGCACACTCCATGATCCTCAATTGAGGCCAAGCATGAAGTGGGTTGTGGAAGCACTTTCTGACATTTCTTTCAAATTGCCTTCACTCCCTTCTTTCCTCTCCCACCCTTTATACATCTCTTTGTCCTCTCCATCTAATACTAGTAATAGTCCTAGCAGCACAAGTGGCACTAGCACCTCCACCACAGATAATGCTACAAGCATAATCACCAACTATGCCTCATCAAACTATGTCACAGCCGCAGGTGAAACTGTGTATGTCACTGCTGAGTACAAAAACAGTGAAATCATCTCTTCTAAGAGCATGAGCCACCACCAGCCGCAGAAACCGTTTCCTGCGGTTGAAACTCCAAGGGAAATATCATTCAAGGAGATTGTTTCTGCTACAAGTAACTTCTCAGATTCAAGAAGGGTGGCCGAGCTAGACTTTGGAACTGCTTACCATGGCATCCTTGATGACAAGTGCCATGTTTTGGTGAAACGCCTTGGTTTGAAGACATGTCCTGCATTGCGTGATAGATTCTCCAACGAACTCCGGAACCTAGGACGGCTTCGCCATAGGAACTTGGTTCAGCTTAGAGGATGGTGCACTGAGCAAGGAGAGATGCTTGTTATTTATGATTACTCAGCAAGTAGAATTCTCAGTAACCAGCTTCAGCATCATAACAATGGAAGTAGAAGTGTGAGTTCTGTTCTCCAATGGGGCCACAGGTACAACATAGTGAAAGCACTGGCCTCTGCAGTTCTATATCTACATGAGGAATGGGATGAACAAGTCATCCACAGAAACATTACCTCTTCAGCCATCATTCTTGAACCAGATATGAATCCAAGACTCACCTCTTTTGCTCTAGCTGAATTTTTGTCAAGGAATGAACACGGTCATGGTCATCATGTAGTCACTGACACTAGAAAATCGGTTCGAGGGATTTTCGGCTACATAGCACCTGAATATGTTGAATCAGGTGAAGCAACCACTGGGGCTGATGTTTATAGCTTTGGTGTGGTGGTGCTTGAAGTTGTTAGTGGACAAATGGCAGTGGATTTCAGGCAGCCAGAGGTGCTTTTGGTGAAGAAGGTTCATGAATTTGAGATGAGAAAAAGGCCATTGAAGGAGTTAGCTGACATGAGACTCAACGGAGAGTACAATGAGAGGGAATTGATGAGATTGGTAAGGTTAGGAATAGCTTGCACCCGATGTAACCCGCAATTACGACCAAGCATGAGACAAATTGTAAGCATCCTTGATGGCAATGACAAATTACTTGTCCAGAATACCAATGAGAGCAGGGAAGAATGGAGAGAAAGAAATTCTTCTTCTTTGTCAATGATTAAGAGAATCCAAGCTCTAGGAATACAGTAA 2559 0.4467 MQFNRLCVVLPPNSGEMVVPLEKGVKQQEPFETPEKQVVEATQKKPQRACGGQVLDFLRDSLAKLYDSRWLRICHKGNNNSNSSGVLFHDMDGVQVSVNIGRDNPRIFSYAELFIGSNGFSKDQVLGSGGFGRVYKAVLPSDGTVVAVKCCLAEKGKQFEKSFAAELTAVADLRHKNLVRLRGWCVNDDQLHLVYDYMPNRSLDRLLFRRHEGLRGEPLQWGQRGKIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGMARWLEHELEFEYDYNKRKTIATKSGHFRLGETSRIGGTIGYLPPESLQKPSNATSKSDVFSFGIVVLEVVSGRRAISLTHPDEQIILLDWIRRLSDEGKLLEAADTRLPDDGSYRLSEMQHFIHIGLLCTLHDPQLRPSMKWVVEALSDISFKLPSLPSFLSHPLYISLSSPSNTSNSPSSTSGTSTSTTDNATSIITNYASSNYVTAAGETVYVTAEYKNSEIISSKSMSHHQPQKPFPAVETPREISFKEIVSATSNFSDSRRVAELDFGTAYHGILDDKCHVLVKRLGLKTCPALRDRFSNELRNLGRLRHRNLVQLRGWCTEQGEMLVIYDYSASRILSNQLQHHNNGSRSVSSVLQWGHRYNIVKALASAVLYLHEEWDEQVIHRNITSSAIILEPDMNPRLTSFALAEFLSRNEHGHGHHVVTDTRKSVRGIFGYIAPEYVESGEATTGADVYSFGVVVLEVVSGQMAVDFRQPEVLLVKKVHEFEMRKRPLKELADMRLNGEYNERELMRLVRLGIACTRCNPQLRPSMRQIVSILDGNDKLLVQNTNESREEWRERNSSSLSMIKRIQALGIQ 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1622 852 SUPERFAMILY Protein kinase-like (PK-like) 104 456 IPR011009 -
Aed9g1622 852 SUPERFAMILY Protein kinase-like (PK-like) 507 817 IPR011009 -
Aed9g1622 852 Pfam Protein tyrosine and serine/threonine kinase 537 814 IPR001245 GO:0004672|GO:0006468
Aed9g1622 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Aed9g1622 852 MobiDBLite consensus disorder prediction 443 462 - -
Aed9g1622 852 SMART serkin_6 120 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1622 852 PANTHER - 3 851 - -
Aed9g1622 852 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Aed9g1622 852 Gene3D Phosphorylase Kinase; domain 1 92 197 - -
Aed9g1622 852 Gene3D Transferase(Phosphotransferase) domain 1 198 426 - -
Aed9g1622 852 Gene3D Transferase(Phosphotransferase) domain 1 613 840 - -
Aed9g1622 852 Pfam Protein kinase domain 121 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1622 852 ProSiteProfiles Protein kinase domain profile. 120 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1622 852 Gene3D Phosphorylase Kinase; domain 1 488 607 - -
Aed9g1622 852 ProSiteProfiles Protein kinase domain profile. 531 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1622 852 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 3 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1622 Aed-Chr9 19542941 19545499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1622 517 815 Receptor kinase-like Gene Family AT5G55830 35.974 4.03e-51 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed9g1622 Pkinase 9.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1622 - - gmx:100796108 1476.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0851 2 6529481 6530391 Aed9g1622 9 19542941 19545499 PCT