Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1583 ATGGAGTTCGGAGGGAACATGTTCTGCCTCGGCAACAGAGACCAAAATGCAAACGGTGCTAACACTTTCGCCTGGGATTCATCGTGGGAAACCCCAACCACAACTACACCTTCCAATACTACTATTATTATTACTAATAATAGTAATAATAACAGTAACACCAGTTCTAGACTGGTCAACGCTTTCGCCAGCCCCGTCGTCGCAGGTGTAGCGGCGACGAATTCATCCGTCGCCGCGACCCGTCACGAGGCGGCGGGATTGACGAACGCGAACGCGTTCATGTTCGGTGGTGGTGGCGTTCTGCGCCAGCACCACCACCAACGCCAGCACCAGCACCAGCACCACCAGCAGCAGCAGAATCCGTACGGCGGGGATGGATCCCACGTGCATCCGGACCCGCACCTCATGTGCTTGAAGCTGGGAAAGAGGCATTACTTTGAGGACACCAGTGGGAGTGTTGCCGCTGCCGCCGCTTTTGGCGGCGGGTTGGTGTTGGGGGACAAGAGAGGAAAAGGGTATTCCACCGGCGGCGCGGCGGTGAAGGCGGTGGGGCTGACAGCGGCGACGGTGCCGAGGTGTCAGGTGGAGGGGTGCCACGTGGCGCTGCTGAACGCGAAGGACTACCACCGGAGGCACAAGGTGTGTGAGATGCACTCAAAGGCTCCAAAAGTTGTGGTGTTAGGCACGGAACAGAGGTTCTGTCAACAGTGTAGCAGGTAA 720 0.5764 MEFGGNMFCLGNRDQNANGANTFAWDSSWETPTTTTPSNTTIIITNNSNNNSNTSSRLVNAFASPVVAGVAATNSSVAATRHEAAGLTNANAFMFGGGGVLRQHHHQRQHQHQHHQQQQNPYGGDGSHVHPDPHLMCLKLGKRHYFEDTSGSVAAAAAFGGGLVLGDKRGKGYSTGGAAVKAVGLTAATVPRCQVEGCHVALLNAKDYHRRHKVCEMHSKAPKVVVLGTEQRFCQQCSR 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1583 239 MobiDBLite consensus disorder prediction 102 129 - -
Aed9g1583 239 ProSiteProfiles Zinc finger SBP-type profile. 190 239 IPR004333 GO:0003677
Aed9g1583 239 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 49 239 - -
Aed9g1583 239 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 49 239 IPR044817 GO:0003677
Aed9g1583 239 Pfam SBP domain 193 239 IPR004333 GO:0003677
Aed9g1583 239 Gene3D - 189 239 IPR036893 GO:0003677|GO:0005634
Aed9g1583 239 SUPERFAMILY SBT domain 191 239 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1583 Aed-Chr9 18785996 18786715 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1583 132 239 SBP-box Gene Family AT5G43270 47.222 1.49e-23 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aed9g1583 SBP 2.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1583 - - gmx:100806582 317.775