Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1573 ATGGTTGATTGGCCCGAAAACTGTTTTACCAGCGGAAATCCACACGAGAAGAAAACATCATCTTGGTTGGTGTTGTTAACTAACTCTCCGCCGATAGATGTGCCCCAGGGCCCAAGACAACATCAAATTTTGCTGAATCCAATGGAACACGAGAAAGCCCCTATCTTGGTGGAGGAAAGGACAATGCAGGAAATTGAGATACCCATTGTTGTCGAAAGACCTGTTGTTCTTCCTACGAAGGCTGACTCATCATCTTGCGATTCTGTTTGTCCTTTTTCCAGACATGAAAACAGTGCTGTGGCATCAAAAGAGTCATCAAAGTCAGCAAAGAAACTCTCCGGACTCATTGTTTTCTATGCTATTGTTATGGTCGTGGAACTTATTGGTGGAATAAAAGCTCACAGCCTAGCTGTCATGAGTGATGCAGCACACTTGCTTTCTGACATTGCTGGATTCTCTATCTCTCTCTTTGCAGTATGGGCTTCGGGTTGGGAGGCAACGCCACACCAATCTTTTGGATACAATCGTCTTGAGGTTTTGGGGGCTCTTGTGTCTGTGCAGTTAATTTGGTGGATATCTGCTTTTTTGATATATGAAGCAGTTGGTAGAATTCTTGGAGCATATTTGCATGTCATGGCTGATATGATTCAGTCTATTGGGGTGATGATTGCTGGAGCCATAATATGGGCAAAGCCTGGGTGGTATATAGTTGACCTTGTGTGTACTCTTATCTTTTCTGTTTTGTCTTTAAGTACTACACTTCCCATGCTTAGGAATATTTATGGAATTCTGATGGAAAGGACACCAAGTGAGATCGATATTACTAAGCTGGAAAATGGCCTCAGAAATATCAAGGGGGTGCAGGATGTTCATGACTTGCACGTTTGGGCTATAACTGTTGGAAAATTTGTTCTGTCTTGCCACGTAGTGGCTGAGCCTGGCATAAGTTCCATTGATTTACTAGGCACGATTAAACATTACTGTGATAAAAAGTATCAAATACAACATGTAACCATACAAATTGAATAA 1029 0.4198 MVDWPENCFTSGNPHEKKTSSWLVLLTNSPPIDVPQGPRQHQILLNPMEHEKAPILVEERTMQEIEIPIVVERPVVLPTKADSSSCDSVCPFSRHENSAVASKESSKSAKKLSGLIVFYAIVMVVELIGGIKAHSLAVMSDAAHLLSDIAGFSISLFAVWASGWEATPHQSFGYNRLEVLGALVSVQLIWWISAFLIYEAVGRILGAYLHVMADMIQSIGVMIAGAIIWAKPGWYIVDLVCTLIFSVLSLSTTLPMLRNIYGILMERTPSEIDITKLENGLRNIKGVQDVHDLHVWAITVGKFVLSCHVVAEPGISSIDLLGTIKHYCDKKYQIQHVTIQIE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1573 342 Gene3D Cation efflux protein transmembrane domain 206 264 IPR027469 -
Aed9g1573 342 Gene3D Cation efflux protein transmembrane domain 108 205 IPR027469 -
Aed9g1573 342 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 55 205 - -
Aed9g1573 342 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 205 342 - -
Aed9g1573 342 PANTHER METAL TOLERANCE PROTEIN B 55 205 - -
Aed9g1573 342 PANTHER METAL TOLERANCE PROTEIN B 205 342 - -
Aed9g1573 342 Pfam Cation efflux family 206 265 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Aed9g1573 342 Pfam Cation efflux family 116 205 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Aed9g1573 342 TIGRFAM CDF: cation diffusion facilitator family transporter 204 342 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Aed9g1573 342 TIGRFAM CDF: cation diffusion facilitator family transporter 112 205 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Aed9g1573 342 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 269 342 IPR036837 -
Aed9g1573 342 SUPERFAMILY Cation efflux protein transmembrane domain-like 110 266 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1573 Aed-Chr9 18606206 18608239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1573 204 342 Inorganic Solute Cotransporters AT2G29410 59.712 2.44e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1573 K14689 - gmx:100789520 259.996