Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed9g1557 | ATGAGGAAGCCCGAGGTAGCAGCAGCATCTGCAAAAAACAACAACAACAACAACATTAATATAAACAACAGCAAGCTTAGAAAGGGGTTGTGGTCACCTGAAGAAGATGAGAAACTGATGAACTACATGGTAAACAGTGGACAAGGTTGTTGGAGCGATGTCGCAAGAAATGCTGGGCTTCAAAGGTGTGGCAAAAGTTGTCGCCTTCGATGGATCAATTACTTGAGGCCTGATCTTAAACGAGGTGCATTCTCTCCACATGAAGAGGAACTCATCATCCATTTCCATTCCCTTCTCGGAAACAGAGCCATCACTAGGTGGGGTGGGGTTAATTTAGATGAATAA | 345 | 0.4406 | MRKPEVAAASAKNNNNNNININNSKLRKGLWSPEEDEKLMNYMVNSGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPHEEELIIHFHSLLGNRAITRWGGVNLDE | 114 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed9g1557 | 114 | SUPERFAMILY | Homeodomain-like | 30 | 102 | IPR009057 | - | |
Aed9g1557 | 114 | ProSiteProfiles | Myb-like domain profile. | 23 | 75 | IPR001005 | - | |
Aed9g1557 | 114 | Gene3D | - | 25 | 81 | - | - | |
Aed9g1557 | 114 | PANTHER | TRANSCRIPTION FACTOR MYB46 | 1 | 102 | - | - | |
Aed9g1557 | 114 | CDD | SANT | 31 | 75 | IPR001005 | - | |
Aed9g1557 | 114 | Pfam | Myb-like DNA-binding domain | 28 | 75 | IPR001005 | - | |
Aed9g1557 | 114 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 23 | 79 | IPR017930 | - | |
Aed9g1557 | 114 | SMART | sant | 27 | 77 | IPR001005 | - | |
Aed9g1557 | 114 | PANTHER | MYB DOMAIN PROTEIN 55 | 1 | 102 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed9g1557 | Aed-Chr9 | 18527217 | 18527764 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed9g1557 | 1 | 102 | MYB Transcription Factor Family | AT5G12870 | 72.549 | 4.17e-50 | 158 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Aed9g1557 | Myb_DNA-binding | 6.2e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed9g1557 | K09422 | - | gmx:100785810 | 171.4 |