Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1531 ATGTCGATGACCAGCGCATCCGGAGGCGACGCTCCCTCTCGCGGCTTTGACACGCCGACGCTGGACCGGGAGTCCGCGGCGCTGCTCCACGCGATATCCGAGCACGGTGGGTACGCGTACGTAAGCATGGCGACGCTGGCGGCCGGCGGCGACATTCGCGCGGCGGAGGCCGCGCGGGAGATGGCCTGGGAGCAGCTGCACTCGGGGCCGTGGCACTCCGTGCTGCCGGTGTGGCGCGACGCCTACTCCATGGCGTGCCTCCACGTGGCGCGCCAACACTACGGCAACGGCGAGTTCAGAGACGCGCTTAGGGTTTTGGATTTGGGAATCATCATGGGAGGCGCGCTCCTCCGCAAGGATTTGGACTCCGCCGTCGCGAAAGTGTCGGAACAAACGAGGAAGACCGTTAGGGTTTCTGATTTGGGGAACTCCGAGCACCGACTCGTCGATCGCAGATTTGATATAGCTGAGGTGCTCCAACTTTTACCTGTGAAGTCTCTTTCTACGAAGCTTGTGGTGAAGAAATCGGCGCTGTCATTGGAGAAATTCCTGAAGGATCATTATCTCTCTGGCTGCCCGGTTATTATCAGCGATTGTATGGCTCACTGGCCAGCCAAGACGAGATGGAATGACGAAGATTACTTGCTGAGAGTTGCCGGTGACCGCACCGTTCCAGTTGAGGTACGGATAAAGTCTGATAGCTGTTCTCCTGGTGGTCCTACATATCTTGCTCAGCATCCATTATTTGATCAGGTTGTTGGAAAAAAATACATTAGGCTTTACTCATCATCTTTGTCTGAGGAACTTTTCCCTCACTCTGGTACCATGCTCCACAATTCCAGCCAGGTTGATTTAGATGATATGGATGAAAAGAAGTTTCGTAAGGTGCAAGAGTTGGAATTTGTAGACTGTATTTTAGAGGAAGGCGAAATGCTATATATCCCGCCAAAATGGTGGCACTATGTGCGGTCTTTGACTACCAGTTTTTCTGTTAGCTTTTGGTGGAGTGAGGCTGAAAGTTCGGATGCATCCTAA 1035 0.5362 MSMTSASGGDAPSRGFDTPTLDRESAALLHAISEHGGYAYVSMATLAAGGDIRAAEAAREMAWEQLHSGPWHSVLPVWRDAYSMACLHVARQHYGNGEFRDALRVLDLGIIMGGALLRKDLDSAVAKVSEQTRKTVRVSDLGNSEHRLVDRRFDIAEVLQLLPVKSLSTKLVVKKSALSLEKFLKDHYLSGCPVIISDCMAHWPAKTRWNDEDYLLRVAGDRTVPVEVRIKSDSCSPGGPTYLAQHPLFDQVVGKKYIRLYSSSLSEELFPHSGTMLHNSSQVDLDDMDEKKFRKVQELEFVDCILEEGEMLYIPPKWWHYVRSLTTSFSVSFWWSEAESSDAS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1531 344 Gene3D Jelly Rolls 154 244 IPR014710 -
Aed9g1531 344 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 245 338 - -
Aed9g1531 344 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 36 229 - -
Aed9g1531 344 PANTHER - 245 338 - -
Aed9g1531 344 PANTHER - 36 229 - -
Aed9g1531 344 Pfam Cupin-like domain 248 338 IPR041667 -
Aed9g1531 344 ProSiteProfiles JmjC domain profile. 137 344 IPR003347 -
Aed9g1531 344 SUPERFAMILY Clavaminate synthase-like 177 336 - -
Aed9g1531 344 Gene3D Jelly Rolls 245 340 IPR014710 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aed9g1531 Cupin_8 4.2e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1531 K24444 - gmx:100813075 592.038