Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1512 ATGTATCCAAAACGGTCAGGCCAAGATGGCCCTGTTTCCAGTCAGGTGCGGTCAAGTGATAGGATCAAGACAAGGCCAAAGATTTATGGCCGGCCATATTTGTATTACAACCAAAGTCTTAGGCGCACCAGGAAAAGCAAGATCAAGACAAGGACTGCAGCTTCACAGATTGCTAAGATGTTGCGTCCAGGGAATCGAAAATCAAAAGATTCTAATTCTAATTCTGGCTCTGCCAACCTCCGACGTTCAACAAGGAAGAGAAGGCTTAATGTAAATCTTGAAGATTTTACAGACAGCTCTGGAGCTGAAGACGAGGACTTAATGAGACCAGCTAAATATCCATCATTGAGGAACCGGATGAACAATAGTGTCAGACGGGATGGTTTGATGTCGAATAAGCGCAAAAGAGCATCAGAGACTAAACAAACACCTCGACGTGAAGGTCTACGCCCTCGTCGTTCAAAGGGTGCTGCAATAGAACGATTAATTTCAGAATCAGATGATGAGCAAGACCTTTCAGAGGAAAAGGTTGATCTGGATGAAACAGAAAATGGAAATGATGAGGAAAATGATGCAGATGATGGCCAAAATGAGATGGAGGGGGAAGATGAAGGTGAGGATGAAGGTGATGAAGATGGTGATGATGAAGAGGGTGAAGAAGAGCAGGATGGAAGAAGGCGCTATGATCTTCGAAATCGTTCAGATGTCCGCAGGTTCTCTATGGAGGAAGGGAAGGCCAGGCCAAGATCTCCTCGAAGAGTGTTACATCAAGGTATGGGAACTAAGGTCAGCAGAGATGTAAGGAAAGGTGGGTCACGAGTTCATAAGCGTCATCGTTTAGCAAGGCCTGAAGATTCTGATGATTCCCTTCTTGTGGATGAGCTGGACCAAGGCCCAGCCATTCCATGGGGGCGAGGTGGCAACCGATCTGCTCCGCCTTGGCTTTTTGGGGGTTTAGACATGCATGGAACAACAGCTTTCGGATTAAATCTTGCTGCATCAGGTTGGGGTCATCAAGGTGATGCTCTGGCTACTCTAACTTCGGGGATTCAAACTGCTGGACCAAGCTCTAAGGGAGGGGCAGATATCCAACCTTTACAGGTTGATGATAGTGTTAGTTTTGACGATATAGGTGGCCTATCTGAATACATTGATGCTCTAAAGGAAATGGTTTTCTTTCCATTATTATATCCAGATTTTTTTGCTAGTTACCACATTACTCCACCTAGAGGGGTATTGTTATGTGGCCCCCCTGGCACAGGGAAAACATTAATTGCAAGAGCTTTGGCTTGTGCTGCTTCTAAAGCTGGCCAGAAGGTTAGCTTTTATATGCGCAAAGGAGCAGATGTGTTAAGCAAGTGGGTTGGTGAGGCTGAAAGACAATTGAAACTACTCTTTGAGGAAGCACAGAGGAATCAGCCTTCTATTATCTTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAGCAAGAACAAATTCACAATTCCATTGTGTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGGCAAGTTGTTTTAATTGGAGCTACCAATAGGATTGATGCTATTGATGGAGCCTTACGACGCCCTGGTAGATTTGACCGTGAGTTTAACTTTGCCTTGCCGGGTTGTGAGGCACGTGCCGAGATATTAGACATTCACACTCGTAAGTGGAAGCATCCTCCTCCAAATGAGCTGAAAAAGGAACTTGCAGCTAGTTGTGTTGGTTACTGTGGTGCTGACCTGAAGGCTCTTTGTACTGAAGCTGCCATCCGTGCATTCCGTCAAAAATATCCACAGGTTTATACTAGTGATGACAAATTTGTCATTGATGTTGATTCTGTCAAGGTAGAAAAGGCTCATTTTATTGAAGCCATGTCTACGATTACTCCTGCTGCTCATAGGGGAGCTATTGTGCACTCTAGGCCATTGTCTCTAGTAGTTCAACCGTGCCTTGAGAGACATTTAGAGAAAGCCATGAGTATAATATCTGATATTTTCCCTCCAGCTTCAATTGCATCAGAGTTGACTAAACTTTCGATGCTCTCCTACGGGTCTGCAATTCCACTTGTGTATCGGCCTAGGCTTCTGCTTTGTGGTGGTGAAGGTACAGGGCTGGATCATCTTGGCCCTGCGGTTTTACATGAGCTGGAAAAATTTCCCGTACATTCATTAGGACTTCCATCTCTTCTGTCAGATCCTAGTGCAAAGACACCAGAGGAGGCATTGGTACATATATTTGGTGAAGCTAGAAGAACAACACCATCAATTCTCTATTTACCACAATTTGATATTTGGTGGGAGACTGCTCATGAACAGCTCAGGGCTGTTCTTCTGACTTTGCTAGAAGAATTACCATCTGACTTGCCTATCTTACTGCTTGGTACATCCTCAGTTGCACTTGCTGAAGTTGAGGAAGTGCCTACTTCCATTTTCCCTCATCGCTCAGTTTATCAAGTGAATATGCCATGTGCCAAAGATAGGACTTTGTTTTTCAATCTTTTGATAGAAGCTGCTATGTCAATATTTTTGGAGGGAATCAACAAGAAATCTCAGGATACAGGATGCCTCCCTGAACTTCCCAAGGCACCTATATTGGCTAGTGGTCCGAAGGTATCTGAGCTAAAAGCAAAGGTGGAAGCTGAGCAGCATGCACTTCGTAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATACTGTATGACAAACGATTTAATGCCTTCCATTATCCAGTGACAGACGAAGATGCACCAAATTATCGTTCAATTATACAGAACCCAATGGACATGGCTACCATCCTGCAGCATGTTGATAATGGCGACTATATTGCATGTGCTGCATTCATGCAGGACATCAATCTCATTGTTTCCAATGCAAAGGCTTACAATGGAGAGGACTACAATGGTTCTAGGATTGTCAGCAGAGCTTGTGAGCTCCGTGATGCGGTGCATGGGATGCTCTCACAGATGGATCCAGCACTGATCGCATATTGCGACAAGATTGCTAGCCAAGGTGGCCCAGTTCAGCTGTCTGATGAATTAGGGGATTCTACATTCCCTGCTACTCCTGTTGTACAGCTGGGACAGAGTACTAGAATGAGTGCTCGACTTCGTCATGTCCAACCAGAGGTTAATATGGATCAGAGTTATGAAGCATTGAAGCGATCTAAGAAGAATACCGAAGTGCATGCAGCAGAAGACAAGTCACAAGATTCTGTACCGTCAAAATCTTCCCAGGAGCACCAGGCAAATGACACAGATTCTGAAATGCTGGAACATGTGTCAATTGACGGAGATTTGCATGGAACTGGCACTTGTACAAATAACAACCACCTTGCTGCTGATGGCAACATTCCTGTTCCTGATGATGTCACAATGCTAGATGATGGTGAATTTTCAACAGAAGTAGAGTCTGTCAAGCAGCTTTTTGTGAAGCGTAGTGAAAATTACAGCATTCCACAGCTTGAAAGGCTTTACACGAGAGTTATGAAGGGCGTGTTTGAAACCAAAAATAAAGGAGTGAATGGAGGAGGAGATCTTAAGTCTTCGGTTTTGAAGTTTTTGTTGAATTTTGTAGAGGATGATGCAAATTTCTAA 3618 0.4425 MYPKRSGQDGPVSSQVRSSDRIKTRPKIYGRPYLYYNQSLRRTRKSKIKTRTAASQIAKMLRPGNRKSKDSNSNSGSANLRRSTRKRRLNVNLEDFTDSSGAEDEDLMRPAKYPSLRNRMNNSVRRDGLMSNKRKRASETKQTPRREGLRPRRSKGAAIERLISESDDEQDLSEEKVDLDETENGNDEENDADDGQNEMEGEDEGEDEGDEDGDDEEGEEEQDGRRRYDLRNRSDVRRFSMEEGKARPRSPRRVLHQGMGTKVSRDVRKGGSRVHKRHRLARPEDSDDSLLVDELDQGPAIPWGRGGNRSAPPWLFGGLDMHGTTAFGLNLAASGWGHQGDALATLTSGIQTAGPSSKGGADIQPLQVDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFALPGCEARAEILDIHTRKWKHPPPNELKKELAASCVGYCGADLKALCTEAAIRAFRQKYPQVYTSDDKFVIDVDSVKVEKAHFIEAMSTITPAAHRGAIVHSRPLSLVVQPCLERHLEKAMSIISDIFPPASIASELTKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDIWWETAHEQLRAVLLTLLEELPSDLPILLLGTSSVALAEVEEVPTSIFPHRSVYQVNMPCAKDRTLFFNLLIEAAMSIFLEGINKKSQDTGCLPELPKAPILASGPKVSELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHYPVTDEDAPNYRSIIQNPMDMATILQHVDNGDYIACAAFMQDINLIVSNAKAYNGEDYNGSRIVSRACELRDAVHGMLSQMDPALIAYCDKIASQGGPVQLSDELGDSTFPATPVVQLGQSTRMSARLRHVQPEVNMDQSYEALKRSKKNTEVHAAEDKSQDSVPSKSSQEHQANDTDSEMLEHVSIDGDLHGTGTCTNNNHLAADGNIPVPDDVTMLDDGEFSTEVESVKQLFVKRSENYSIPQLERLYTRVMKGVFETKNKGVNGGGDLKSSVLKFLLNFVEDDANF 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1512 1205 MobiDBLite consensus disorder prediction 128 166 - -
Aed9g1512 1205 CDD AAA 408 547 - -
Aed9g1512 1205 Pfam AAA+ lid domain 574 611 IPR041569 -
Aed9g1512 1205 MobiDBLite consensus disorder prediction 220 250 - -
Aed9g1512 1205 Pfam ATPase family associated with various cellular activities (AAA) 412 545 IPR003959 GO:0005524|GO:0016887
Aed9g1512 1205 Gene3D - 884 1012 IPR036427 GO:0005515
Aed9g1512 1205 PANTHER BNAC08G44480D PROTEIN 1 1200 - -
Aed9g1512 1205 SUPERFAMILY Bromodomain 890 1003 IPR036427 GO:0005515
Aed9g1512 1205 MobiDBLite consensus disorder prediction 1061 1081 - -
Aed9g1512 1205 MobiDBLite consensus disorder prediction 1 28 - -
Aed9g1512 1205 CDD Bromo_AAA 892 1002 - -
Aed9g1512 1205 SMART AAA_5 408 549 IPR003593 -
Aed9g1512 1205 SMART bromo_6 892 999 IPR001487 GO:0005515
Aed9g1512 1205 Pfam Bromodomain 905 973 IPR001487 GO:0005515
Aed9g1512 1205 ProSitePatterns AAA-protein family signature. 517 535 IPR003960 GO:0005524|GO:0016887
Aed9g1512 1205 MobiDBLite consensus disorder prediction 167 219 - -
Aed9g1512 1205 PRINTS Bromodomain signature 924 940 IPR001487 GO:0005515
Aed9g1512 1205 PRINTS Bromodomain signature 940 958 IPR001487 GO:0005515
Aed9g1512 1205 PRINTS Bromodomain signature 958 977 IPR001487 GO:0005515
Aed9g1512 1205 Gene3D - 370 640 IPR027417 -
Aed9g1512 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 637 IPR027417 -
Aed9g1512 1205 PANTHER AAA DOMAIN-CONTAINING 1 1200 IPR045199 -
Aed9g1512 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 696 911 IPR027417 -
Aed9g1512 1205 MobiDBLite consensus disorder prediction 40 287 - -
Aed9g1512 1205 Gene3D - 548 633 - -
Aed9g1512 1205 ProSiteProfiles Bromodomain profile. 915 977 IPR001487 GO:0005515
Aed9g1512 1205 MobiDBLite consensus disorder prediction 1061 1095 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1512 Aed-Chr9 18169051 18175712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1512 358 612 Calmodulin-binding Proteins AT3G56690 36.680 3.56e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1512 K22531 - gmx:100787765 2122.44