Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1497 ATGAATTCTTCTGGCCACGAACATCATGATCAACAACAACAAAAACAACAAACTCAAACTGAAACTCGAACTTATGATCAATCATCACAACCTTATTATCCATATAATTATGCACGAGAAGACCCCAACTTGATCCCAGTAATAGCCCCTGAACAACAACAACAACAACAACAACAACACTCTCATTCTGCTGCCGAACCCGCCGCGCCGAACCCGCTCCCGGCTGCGCCGGTTGCCGGTGCCATCAACCCTGAGGCTGTGGCGGTTGTAGCGGGAGCTCTCGCGCAGCTTGTGGGGAACCTTGACGGGCCGCAACCGATTGGGCCATCTCAATACAGAGGGGCAGGACGCAGGGGTGGTAGATCATGTAGAGGCTATGGTCGTGGCCGATTCAATCACCACCGTGGTAGGGGATGTGGCAGGAGTGGTGATGGCAGACAGTTCTTATCTCATTCTTCTGAAGCCACTATTGCTAATCTAGCAGATGCACCTGCTGCCGATGCAACTGCTTCAGTGATGCAACCATCATCAGTCTCTGGGCCCTCATCATCTTCTAATCCAGCCCAAGTTCCATCTGCACCATTGCAAGCAGGTCCATGTAAGTTATGGTGTGAAATTTGTAAGGCTGAGTGCAATACTCCAGAAATGTTGGAGCAGCATAAGAATGGAAAGCGGCATAGGAAGAACTTGCTTGTGCATGAAGAAGTACAGAGACTCAAAGTTCTAAATGGACAACAGGGTGGAAACATTTCTACTTCTGAAACGAATTTAACAATCCAACCTGAGAATGTTCAGGAATCTGAGAAAAAAGGATTACCAGAAGAAAATATGAGTTCTGAAGCTACAACTGATAATCACAATGATGAAACTAAGCTTCAGAATAATGTAGAAGGGGTGTCTGAAGTTCAAACTAAAGAGCCTCAGGAGGAACCTAGAGGCAACTCTGCCATACAGGGTCATGGATTGAAGCGTAAGATGAGAGGATACGGAGGAGGTAAATACATGAGGAGTGGTGATGGGTCAAGAAAATCAGTGGAACCTCCAAAGCCTAAGCATTTCATATGTGAGTTGTGCAATGTTAAATGTGATTCCCAGGTTGTGTACAATAGTCATTTGACGGGAAAAAAGCACTTGTCAAATTTCAAGCGTGTCCATGGATACCAGCCTTTGAATGGAGAAGCAGGGATTCAACCACTTCACGCTCCTGATATCAATGCTCTATCAAATGCAAATAATTTTCCGATCCAGCAGGGTGTTAGTGCCCCTCTAGGTGTCAATGATCCACGAAACCTTCTGGCTCAGCTCCTGATGAATGTGTTATCTAATGTCCAACTACCAGAGGCGGCACCACTGTTAGGTGCCGTAGCCGCCCAGATACAAGTGCCAACACTGAGGGCCAGATCAAGTCATGAACCCCTATGTCAAAATTTGTCACAGACACAAGTCTCGGATTCCTTGGCACATTTTGAGAGCAAAAATCCTACTGGGGAAGCAAAAGATCCGATGTCTTCTGTCACATTGCAACTGGATGAGACCGCAGGTTCAAGCAATAATGGTAACATCGAAACTGCAGATGGAACACATGCAAAGGAAGAAACGGCATTGAAACTTTCCCAGGATAGTTATGACACCAGCAGAAGCAAATAA 1647 0.4608 MNSSGHEHHDQQQQKQQTQTETRTYDQSSQPYYPYNYAREDPNLIPVIAPEQQQQQQQQHSHSAAEPAAPNPLPAAPVAGAINPEAVAVVAGALAQLVGNLDGPQPIGPSQYRGAGRRGGRSCRGYGRGRFNHHRGRGCGRSGDGRQFLSHSSEATIANLADAPAADATASVMQPSSVSGPSSSSNPAQVPSAPLQAGPCKLWCEICKAECNTPEMLEQHKNGKRHRKNLLVHEEVQRLKVLNGQQGGNISTSETNLTIQPENVQESEKKGLPEENMSSEATTDNHNDETKLQNNVEGVSEVQTKEPQEEPRGNSAIQGHGLKRKMRGYGGGKYMRSGDGSRKSVEPPKPKHFICELCNVKCDSQVVYNSHLTGKKHLSNFKRVHGYQPLNGEAGIQPLHAPDINALSNANNFPIQQGVSAPLGVNDPRNLLAQLLMNVLSNVQLPEAAPLLGAVAAQIQVPTLRARSSHEPLCQNLSQTQVSDSLAHFESKNPTGEAKDPMSSVTLQLDETAGSSNNGNIETADGTHAKEETALKLSQDSYDTSRSK 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1497 548 MobiDBLite consensus disorder prediction 102 129 - -
Aed9g1497 548 MobiDBLite consensus disorder prediction 262 291 - -
Aed9g1497 548 MobiDBLite consensus disorder prediction 490 548 - -
Aed9g1497 548 MobiDBLite consensus disorder prediction 171 194 - -
Aed9g1497 548 MobiDBLite consensus disorder prediction 267 291 - -
Aed9g1497 548 PANTHER OS06G0651300 PROTEIN-RELATED 9 503 - -
Aed9g1497 548 SMART c2h2final6 202 226 IPR013087 -
Aed9g1497 548 SMART c2h2final6 353 377 IPR013087 -
Aed9g1497 548 MobiDBLite consensus disorder prediction 171 192 - -
Aed9g1497 548 MobiDBLite consensus disorder prediction 1 77 - -
Aed9g1497 548 MobiDBLite consensus disorder prediction 48 65 - -
Aed9g1497 548 MobiDBLite consensus disorder prediction 15 34 - -
Aed9g1497 548 SUPERFAMILY beta-beta-alpha zinc fingers 335 384 IPR036236 -
Aed9g1497 548 SMART ZnF_U1_5 201 233 IPR003604 GO:0003676|GO:0008270
Aed9g1497 548 SMART ZnF_U1_5 350 384 IPR003604 GO:0003676|GO:0008270
Aed9g1497 548 Gene3D Classic Zinc Finger 336 383 - -
Aed9g1497 548 Gene3D Classic Zinc Finger 190 233 - -
Aed9g1497 548 MobiDBLite consensus disorder prediction 497 524 - -
Aed9g1497 548 Pfam Zinc-finger of C2H2 type 203 226 - -
Aed9g1497 548 Pfam Zinc-finger of C2H2 type 353 377 - -
Aed9g1497 548 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 9 503 - -
Aed9g1497 548 SUPERFAMILY beta-beta-alpha zinc fingers 201 230 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1497 Aed-Chr9 17849837 17856394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1497 353 377 C2H2 Transcription Factor Family AT5G61190 68.000 3.75e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed9g1497 zf-met 3.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1497 - - gmx:102666037 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1497 9 17849837 17856394 Aed2g1158 2 9606837 9613071 PCT