Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1496 ATGTCGTCAAATTTGCATGGGGATTATAACCAAAAGATAGATTACGTGTTCAAGGTGGTGTTGATTGGGGACTCTGCAGTTGGTAAAACTCAATTGCTTGCACGTTTTGCTAGGAACCAATTCAGCCTCGATTCCAAGGCAACCATTGGGGTTGAGTTTCAGACTAAAACTCTCATCATTGATAACAAGACCATCAAGGCTCAGATATGGGACACCGCTGGCCAAGAAAGAGGTGCTGTAGGAGCAATGTTAGTGTATGACATGACCAAGAGACAATCATTCGATCATATGGTAAGGTGGTTGGAAGAGTTGAGAGAGCACACAGACCAAAGCATTGTGATAATGCTAATTGGGAACAAGTGTGATTTGGGGAGCCTCAGAGCAGTGCCAATGGAAGATGCAGAGGAGTTTGCACAAAGAGAGAACCTGTTCTTCATGGAGACATCAGCACTTGAGTCCACTAATGTTGAAACTTGTTTTTTGACAATTCTAACTCACATATACCGGATTCATGCCAAGAAATCACTCACTGTCACTGATGATGATAATGGGGTTTCAGGGCTTATGAAGGGAAGCAGAATAATTGTTCCCAACCAAGAGATAGATAATAATGGTGGAAAACAAAAAGATTCTCTCTTTCTACCACAAGATGAAGGTGAATGGAAGTTACAATTTGACTAG 681 0.417 MSSNLHGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNQFSLDSKATIGVEFQTKTLIIDNKTIKAQIWDTAGQERGAVGAMLVYDMTKRQSFDHMVRWLEELREHTDQSIVIMLIGNKCDLGSLRAVPMEDAEEFAQRENLFFMETSALESTNVETCFLTILTHIYRIHAKKSLTVTDDDNGVSGLMKGSRIIVPNQEIDNNGGKQKDSLFLPQDEGEWKLQFD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1496 226 SMART rab_sub_5 17 170 - -
Aed9g1496 226 SMART ran_sub_2 22 221 - -
Aed9g1496 226 TIGRFAM small_GTP: small GTP-binding protein domain 16 162 IPR005225 GO:0005525
Aed9g1496 226 Gene3D - 9 190 IPR027417 -
Aed9g1496 226 PANTHER SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 3 203 - -
Aed9g1496 226 SMART ras_sub_4 14 170 - -
Aed9g1496 226 PRINTS Transforming protein P21 ras signature 145 167 - -
Aed9g1496 226 PRINTS Transforming protein P21 ras signature 40 56 - -
Aed9g1496 226 PRINTS Transforming protein P21 ras signature 17 38 - -
Aed9g1496 226 PRINTS Transforming protein P21 ras signature 58 80 - -
Aed9g1496 226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 179 IPR027417 -
Aed9g1496 226 CDD Rab11_like 14 168 - -
Aed9g1496 226 SMART rho_sub_3 19 169 IPR001806 GO:0003924|GO:0005525
Aed9g1496 226 ProSiteProfiles small GTPase Rab1 family profile. 12 226 - -
Aed9g1496 226 ProSiteProfiles small GTPase Ras family profile. 11 224 IPR001806 GO:0003924|GO:0005525
Aed9g1496 226 Pfam Ras family 18 168 IPR001806 GO:0003924|GO:0005525
Aed9g1496 226 PANTHER - 3 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1496 Aed-Chr9 17846813 17848407 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1496 K07904 - gmx:100806396 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1634 2 20640984 20641880 Aed9g1496 9 17846813 17848407 PCT