Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1494 ATGGGGCGCGGGCGCGGACGCGGAAGGAGGAAGCCCACATCGATCAGACCCATTTCCGTGTACGCAAACTCCGTAACGCAAGAGGCGCAGTCTTTGGGTGACGCCGATGAGGTCAAAACGGTCAATTTGCCTGATGGAGAAAGAAACAACGATGATGTGGCTGCCGGGGAAGGCGCGAAGAAGAAGCGTGGGAGGAAAAGGAAAAGGGTGGAGGAGAATGAGGACGCGAAAGAGGGAAATTTAATATTGGGCAAAGAAAATGTTCAAGAAGGTGAGGATTTTGAGCAGAGATGCTTTTTAAAAAGAATGAAAACGCTTGAGTTTGAGCTTCTGATTCTAAAAGATAAAGATAATGATGGTGACGGCGATGATGATGATGAGGGGCTTGGAAATGAGTCCTCAACATGCCACCAATGCCAAAGTAGCGATGAAGGGAGGGTTATGATGAGGTGCAAAAGTTGTAAGTGGAGAAGATTCTGCATTCCGTATCCTCATTTGAAAGAGGATGATGTTGCTCAGCGTTGTCCCGTGTGCTGTGGTAATTGCAACTGCAGAGCATGCTTGAGATCTGATGAACTCATTAAAAAAATGAAGGACAAGGCAAACACCAATGAAGACGAGGAGAAGATTGAACACTCTATGGATTTGCTGCAATTACTTCTTCCCTATTTGAGGCAGTTGGATGAAGAACAAATGATTGAGAGTGAGACAGAAGCTCAGATACAAGGTTATTATACGTGTGAATCAATAAGCTGTACAAAATGCTCTTTTGACCTTTGTCTCATCTGTTGCCGTGAGCTTCGTAATGGGCAGCTTGTAGGTGGTGCAGATCCAATTGCATGGGAGTTTGTCTTTCAAGGTCTTGGTTACATGCATGGTCATACAGAACAAAAAATGGCAAAACAAAATGCATCAAATGCTGATGCTAAGCCTGAGGTTTGTGAATGGTCAAGATCTGGGTGGCATGCAGAAAGTAATGGTAGCATTCCTTGTCCAAAAGTCAACAATGAATGTAACCATGGTTTCCTTGAACTGAGAACCTTATTAGGCAAACATTTTATCACTGAGATAGTGCAAAAAGCAAACAAACTAGCACATGCATACAATCTTCAAGGTGTATATAAGAACCCTGAAAACTTCTGTTCATGTTTGAGACTTGGTAGAAACACAGATGTTACATATAATAATATGAGGAAGGCAGCTTCCCGTGAAGATTCCAGTGATAACTATTTATACTGTCCTAGGGCTGTAGATCTACTGCCCAAAGATTTAAGGCATTTCCAGTGGCATTGGTTAAAGGGGGAGCCTGTCATTGTCAGCAATGTGCTTGAATGTAAATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCAGCGCTAATCATGATCAACATTTGAATGTGAAGGCAATTGATTGCTTAGATTGGTGTGAGGAAGAAATTAATATCCACCAATTCTTTACTGGCTATACAGAAGGTCTTAAAGATTGGTTTGGTTGGCCTAAGATAACGAAATTAAAAGACTGGCCTCCTTCTAATTTATTTGAGGAACCTTTGCCCCGTCATTGTGCTGAGTTCATATCTTCCTTGCCCTTCAAGGAATATACAGATCCTCTCAGAGGTGCTCTAAACCTTGCTGTGAAGTTGCCTAAAGATTGTCTAATGCCAGACATGGGGCCAAAGACATATATTGCATATGGATTTCCTCAGGAGTTGGGGCGTGGTGATTCAGTGACGAAGCTCCATTGTGACATGTCTGATGCGGTAAATTTGTTGACTCATGTTGCTGAGGTGAAATGGAAACCAGGGCAACTTGCTGTCGTTGAGGCATTGAAACAAAAGCACTTTGAGCAAGACAAAAAGGAGCTATTTGGTGATGATCAGAATGGAGAAACTAAAGTTGGAAACAATTCGTCTTCTACCATAAGTGCTTTGGACAAGCAAAATCATGACCAATTCATGGAAAATGAAGGTGCTCTATGGGATATTTTTCGGAGACAGGATGTACCTAAATTGCAGGAATATCTGAAGAAGCATTTCAAAGAGTTTAGGCATATCCATTGCTGTCCTTTAAAGCAGGTTGTTCACCCCATCCATGACCAGACCTTCTATCTGACTATGGAACATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGAGTTTTGCTCAGAAGTTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATTAAGGTTGCGTTGGATTTTGTCTCTCCTGAAAATGTTGGGGAGTGCTTTCGTTTGACAGAGGAGTTTCGAACACTTCCAATAAACCACACGTCTACTGAGGACAAATTGCAGGTGAAGAAGATGACAGTATATGCAATGCAAGATGTGCTCAGAAAACTGGAGGAATTTGAGAGGATTTGCAGAGTACGTCTAGGAAACCAAGGTCAAGAGTAA 2466 0.4254 MGRGRGRGRRKPTSIRPISVYANSVTQEAQSLGDADEVKTVNLPDGERNNDDVAAGEGAKKKRGRKRKRVEENEDAKEGNLILGKENVQEGEDFEQRCFLKRMKTLEFELLILKDKDNDGDGDDDDEGLGNESSTCHQCQSSDEGRVMMRCKSCKWRRFCIPYPHLKEDDVAQRCPVCCGNCNCRACLRSDELIKKMKDKANTNEDEEKIEHSMDLLQLLLPYLRQLDEEQMIESETEAQIQGYYTCESISCTKCSFDLCLICCRELRNGQLVGGADPIAWEFVFQGLGYMHGHTEQKMAKQNASNADAKPEVCEWSRSGWHAESNGSIPCPKVNNECNHGFLELRTLLGKHFITEIVQKANKLAHAYNLQGVYKNPENFCSCLRLGRNTDVTYNNMRKAASREDSSDNYLYCPRAVDLLPKDLRHFQWHWLKGEPVIVSNVLECKSGLSWEPLVMWRAFSANHDQHLNVKAIDCLDWCEEEINIHQFFTGYTEGLKDWFGWPKITKLKDWPPSNLFEEPLPRHCAEFISSLPFKEYTDPLRGALNLAVKLPKDCLMPDMGPKTYIAYGFPQELGRGDSVTKLHCDMSDAVNLLTHVAEVKWKPGQLAVVEALKQKHFEQDKKELFGDDQNGETKVGNNSSSTISALDKQNHDQFMENEGALWDIFRRQDVPKLQEYLKKHFKEFRHIHCCPLKQVVHPIHDQTFYLTMEHKRKLKEEYGIEPWSFAQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHTSTEDKLQVKKMTVYAMQDVLRKLEEFERICRVRLGNQGQE 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1494 821 SUPERFAMILY Clavaminate synthase-like 421 792 - -
Aed9g1494 821 Gene3D Cupin 415 783 - -
Aed9g1494 821 MobiDBLite consensus disorder prediction 117 139 - -
Aed9g1494 821 MobiDBLite consensus disorder prediction 1 75 - -
Aed9g1494 821 ProSiteProfiles JmjC domain profile. 540 774 IPR003347 -
Aed9g1494 821 MobiDBLite consensus disorder prediction 17 33 - -
Aed9g1494 821 SMART cupin_9 521 774 IPR003347 -
Aed9g1494 821 MobiDBLite consensus disorder prediction 40 59 - -
Aed9g1494 821 Pfam JmjC domain, hydroxylase 660 757 IPR003347 -
Aed9g1494 821 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 49 805 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1494 Aed-Chr9 17787956 17794959 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aed9g1494 JmjC 2.5e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1494 K15601 - gmx:100780803 1078.54