Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1493 ATGAAGGCCGTGCCCCTACCCTTTCAGGAATTTAGAGGGAACGGGGTGTTAGATTTTTCTTCTGTTGGTGTTGGTACTGTTTCAGATTCGTTGTTACTCCCACAACAGCAGCAAGAGCAATTTCTGCAAAGGTGGAACCCCAACAACAACAGGGAAAACTGTTGCTATGTGGGCATTGAGCCCACTTCTGGTTTCGACCTCAAAAGGAAAACAATCAGCCCTCCCACATCCACATCTACGCTGTCTTCCTCACGCGCGAGCAGCGCCGGTGGCGGCAGTGGAGGAGGCTGCGGCTCCACCGATAGCACCTCCGGCGCGGCCACGGCAAAGGCCGAGAAGGAGAACAACCCTCCTCCCCAAGCAGGGTTAGAGGTTGGACTTGGGCAGGCAAGATGTGGGCTTGGAATGGAGGATTGGGAGAGTGTGTTGTCTGAGTCACCGGGTGGTCAAGATCATCATTCCATACTGAAATTGATTATGGGGGACATTGAGGACCCATCTGTGGGTTTGACCAAGCTTTTGCAGGGTGGAAGTGCATCCTCTCAGGATGTTGAATTCAATGGGGTTGGAGTGGGTTTTGGTTTGGTGGATCAAAGTTCTGTGCTTGACCCTATTACTAGTGTCAACTTTGTGAGCAGCAGCATTGACCCTTCTTCTGGACATGGGAATTGTTCTGATTTCCCTTTCAATTCCAACAGTAATGTTAGCCCCAGTATTCCCAGAGTTGGTTCTGGTGTGAATCTAAACCCCGGGTTCCCGGCTTCAGCTAGCAATCTCTTACCAGTTATGCTCCCTCAGGGTGTGTTTCAGTCTCAACAACAACCAATAGAGCCTCTGGATGAGAAGCTACAAGTTCTCAATCACCAGTTCATTTTGAACCAAAATCAGTCTCAGTTTATGCCAAACCCAGGTTTGGTTTTGCCTTTGACATATGCTCAGCTGCAAGAACATCATCAGCTTCTCCCTCAGCCTCCAGCAAAACGTCTGAATTGTGGCCCGAATTATCAGGTTCCAAAGGCACCCTTTTTGGACTCTGGCCAAGAGCTGTTACTTCGGAGGCAGCAACAGCAGCAGCTTCAACTGCTTCCTCACCATCTGCTGCAGAGGCCATCATCCATGGTGGTGGCACCGAAGCAGAAAATGGTCAACCCTAGCGGCGGTGAAGACTTGGCTACCCACCAGCTTCAACAGGCTATAACTGAACAGCTTTTCAAAACTGCAGAGCTGATCGATGCCGGTAATCTGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAACTTTCTCCCATTGGGAAGCCTTTTCAGAGGGCTGCTTTTTATTTCAAAGAGGCCTTGCAATTACTTCTCCATTCAAATGCCACCAACAACAGTTCTTTCACCTTCTCACCCACTCGCCTTTTGCTCAAGATTGGTGCTTACAAATCATTCTCTGAAATCTCACCAGTTCTGCAGTTTGCCAATTTCACTTGTAACCAAGCGCTGCTTGAAGCAGTGGACGGGTTTGATCACATTCACATAATAGATTTTGACATTGGGTTCGGTGGACAGTGGTCTTCTTTCATGCAAGAGTTAGCACTGAGGAACGGTGGTGCACCTGAACTCAAGATCACTGCATTTGTGTCACCCTCCCACCATGATGAAATTGAGCTCAGTTTCACTCAAGAGAATTTGAAGCAATATGCTGGGGAGATTAACATGTCCTTTGAGCTCGAGATTCTGAGCCTAGATTCTTTAAACTCTGCTTCCTGGCCCCAGCCACTTCATGACTGTGAAGCTGTGGTGGTTAACATGCCTATCGGCTCTTTCTCGAATTATCCATCATATCTACCTTTGGCCCTTCGCTTTGTGAAGCAGCTCTTGCCAAAAATTGTGGTTACATTGGATAGAAGTTGTGATCGAACTGATGCACCATTTCCTCAGCATCTGGTTTTTGCACTTCAGTCTTATTCAGGTCTGCTCGAGTCACTTGATGCTGTTAATGTTCACCCAGATGTCCTGCAGATGATTGAGAAGTATTATCTCCAACCAGCAATGGAGAAGCTTGTTCTGGGCCAACATGGTTCGCAGGAAAGAGCACTTCCTTGGAAAAACCTTCTCTTGTCATCTGGGTTTTCGCCATTGACATTTAGTAACTTCACAGAATCCCAGGCAGAGTGTTTGGTGCAGCGGACTCCTGGTAAGCGATTCCACGTCGAGAAGAGGCAGTCGTCCCTTGTTCTTTGCTGGCAAAGGAAGGATCTCATCTCCGTTTCAACTTGGAGATGCTGA 2274 0.4833 MKAVPLPFQEFRGNGVLDFSSVGVGTVSDSLLLPQQQQEQFLQRWNPNNNRENCCYVGIEPTSGFDLKRKTISPPTSTSTLSSSRASSAGGGSGGGCGSTDSTSGAATAKAEKENNPPPQAGLEVGLGQARCGLGMEDWESVLSESPGGQDHHSILKLIMGDIEDPSVGLTKLLQGGSASSQDVEFNGVGVGFGLVDQSSVLDPITSVNFVSSSIDPSSGHGNCSDFPFNSNSNVSPSIPRVGSGVNLNPGFPASASNLLPVMLPQGVFQSQQQPIEPLDEKLQVLNHQFILNQNQSQFMPNPGLVLPLTYAQLQEHHQLLPQPPAKRLNCGPNYQVPKAPFLDSGQELLLRRQQQQQLQLLPHHLLQRPSSMVVAPKQKMVNPSGGEDLATHQLQQAITEQLFKTAELIDAGNLELAHGILARLNHQLSPIGKPFQRAAFYFKEALQLLLHSNATNNSSFTFSPTRLLLKIGAYKSFSEISPVLQFANFTCNQALLEAVDGFDHIHIIDFDIGFGGQWSSFMQELALRNGGAPELKITAFVSPSHHDEIELSFTQENLKQYAGEINMSFELEILSLDSLNSASWPQPLHDCEAVVVNMPIGSFSNYPSYLPLALRFVKQLLPKIVVTLDRSCDRTDAPFPQHLVFALQSYSGLLESLDAVNVHPDVLQMIEKYYLQPAMEKLVLGQHGSQERALPWKNLLLSSGFSPLTFSNFTESQAECLVQRTPGKRFHVEKRQSSLVLCWQRKDLISVSTWRC 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1493 757 ProSiteProfiles GRAS family profile. 390 756 IPR005202 -
Aed9g1493 757 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 756 IPR005202 -
Aed9g1493 757 Pfam GRAS domain family 400 756 IPR005202 -
Aed9g1493 757 PANTHER SCARECROW-LIKE PROTEIN 6 17 756 - -
Aed9g1493 757 MobiDBLite consensus disorder prediction 69 110 - -
Aed9g1493 757 MobiDBLite consensus disorder prediction 66 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1493 Aed-Chr9 17779913 17782186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1493 399 757 GRAS Transcription Factor Family AT4G00150 59.945 1.45e-139 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed9g1493 GRAS 1.3e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1493 - - gmx:100792973 1172.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1493 9 17779913 17782186 Aed2g0937 2 7341925 7344195 PCT