Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1482 ATGTTAAAGATTCGCGGATTCAACCTCAGGAAGCGCCTCACCAGGGTCTCTGGATGGATCTTCCGGAGAATTCGGAAGCGGACCCCACCCAAATACCGTCGTCTGGGTGACTCTCCTCAGTCACATGTGGGGAAGCTTATCGGGTGGGGCCGCAAGCTGACAGAGGGTGCCAAGTCCCGCTTGAAAGTAGCATCCGGGTCAGGCTATGTTCAGTTAGGAACCGACCCGGATCCAACTGTGCCAAAGGGGCACCTGGCTGTGTATGTGGGGCCGAAGGACGGCGAGTTGCACCGTGTTTTTGTGCCAGTATTATACTTTAACCACCCTTTGTTCGGGGAATTGCTGAAGGAGACAGAGGAGGAGTTCGGGTTCCACCACGACGGCGGAATCACAATCCCATGCCGAGTCACCGAGTTTGAACGGGTCAAGACCCGAATTGCATCCAGATTCCATCCTAAATGA 462 0.5476 MLKIRGFNLRKRLTRVSGWIFRRIRKRTPPKYRRLGDSPQSHVGKLIGWGRKLTEGAKSRLKVASGSGYVQLGTDPDPTVPKGHLAVYVGPKDGELHRVFVPVLYFNHPLFGELLKETEEEFGFHHDGGITIPCRVTEFERVKTRIASRFHPK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1482 153 Pfam Auxin responsive protein 65 143 IPR003676 GO:0009733
Aed9g1482 153 PANTHER SMALL AUXIN-UP RNA-RELATED 1 149 - -
Aed9g1482 153 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1482 Aed-Chr9 17489595 17490056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1482 75 153 Calmodulin-binding Proteins AT3G43120 49.367 6.16e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1482 K14488 - gmx:100783436 249.21