Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1477 ATGGCTATCAGAGACTCTCTGGACCCACAGAACCGTGTCCTGCTCTCGTGGGTCCCGCATTCGGATCCATGCGGCGGTGGCGGCGCCTCCTTCGAGGGCGTCGCGTGCAATGAGAAAGGCCTTGTTAGCAACATTTCACTGCAGGGAAAGGGTCTTTCTGGAAGCATACCCGAGGCCGTGGCGGGTCTCAAAAGCTTGACGGTTTTGCAGCTTTGTTATAACAAGTTTAGTGGGAGCATACCCACTGAACTTGGAAGGTTAAGAAAGCTGAGTGTTGTTGCACTGGAATATAATCAATTAAGTAGCGCAATTCCTGCGAGTTTGGGTGAAGTGGAAACATTGGCGCGGTTGGATCTGAGCTTCAATAGCCTTTTTGGTCCAATTCCAGTGACATTGGCTAATGCACATAAACTGGAGAGTTTAGATATTCGAAACAATTCTCTCTCTGGCCATGTCCCTTTAGGTTTATGTGGGACTGGATTTCTCCATTTAGATTCTTGCAAAGCAGTCAGCAGTTCAGACCCAGTTAGACCCGAACCCTACGTGCCTGCCGATATCATTTCCACCAAAGATCTCCCTTCATCAATTCAACCAAAACCCGAAAACTGCGGCGCTGCTCATTGTAAAAGAACATCATCATCCTCATCGAAGTCTTCAAAAATCGGTTTGGTCTTTGCCATAATTGGAGTCATCGTTGCTTCATCTGCTATCGGACTTTTCGTGCTCTCTTGGCGCCACCGTCGTCAGAAACAGAGAATTGGAAGTTCCGACACAAGCTGCAAGTCTGATGAAGCCGAATTCTTGAATGGTTTGAAGGTGTTGACCTCGTTGAGGCACGAGAATCTGGTTCGGTTGAGAGGGTTCTGCTGTTCGAAAGGCCGCGGTGAGTGTTTTCTTATTTATGAGTCTCTTTCGAATGGGAGTTTGTTGCAGTATCTTGATGTTGAGAGAGACAATGGTAGGGTGCTTGAATGGTCTACCAGAGTGTTCATCATTCGTGGCATTGCCAAAGGTATCGGTTACCTGCACAGGAAGAAAGGAAGCAAACACGGTGTAATAGTTCACCAGAACATATCAGCTGAAAATATACTTCTGGATGCTTGGTACAACGCGCTACTTGCAGATTCAGGAGTGCACAAGCTCCTCGCCGATGATGTCGTCTTCTCCGCTCTCAAAGCTAGCGCTGCCATGGGATATCTGCCTCCAGAGTACGTGACAACCGGCCGTTTGACCGAAAAGAGCGATGTATATGCATTTGGAGTGATAGTTTTCCAGCTTCTCACCGGAAAACGCGATTTTACTCATCAGCTAACTTGCCAACGCCAACCGGCGATAAAGAGTGCTAGTTTGGAAGATATAGTCGATGGAAATCTCGAAGGTAGGTTCTCGGAATCGGAGGCGACAAAGCTGAGGAGAGTTGCTTTGCTTTGCACGCTTGAATCCCCACATCTTCGACCTTCTATGGAAAATATAATGCTGGAACTGGGTGATAAAGATAAACAGTAG 1506 0.4741 MAIRDSLDPQNRVLLSWVPHSDPCGGGGASFEGVACNEKGLVSNISLQGKGLSGSIPEAVAGLKSLTVLQLCYNKFSGSIPTELGRLRKLSVVALEYNQLSSAIPASLGEVETLARLDLSFNSLFGPIPVTLANAHKLESLDIRNNSLSGHVPLGLCGTGFLHLDSCKAVSSSDPVRPEPYVPADIISTKDLPSSIQPKPENCGAAHCKRTSSSSSKSSKIGLVFAIIGVIVASSAIGLFVLSWRHRRQKQRIGSSDTSCKSDEAEFLNGLKVLTSLRHENLVRLRGFCCSKGRGECFLIYESLSNGSLLQYLDVERDNGRVLEWSTRVFIIRGIAKGIGYLHRKKGSKHGVIVHQNISAENILLDAWYNALLADSGVHKLLADDVVFSALKASAAMGYLPPEYVTTGRLTEKSDVYAFGVIVFQLLTGKRDFTHQLTCQRQPAIKSASLEDIVDGNLEGRFSESEATKLRRVALLCTLESPHLRPSMENIMLELGDKDKQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1477 501 Gene3D Transferase(Phosphotransferase) domain 1 304 501 - -
Aed9g1477 501 Gene3D Phosphorylase Kinase; domain 1 247 302 - -
Aed9g1477 501 PANTHER BNAC04G56910D PROTEIN 1 69 - -
Aed9g1477 501 PANTHER BNAC04G56910D PROTEIN 68 256 - -
Aed9g1477 501 PANTHER BNAC04G56910D PROTEIN 257 496 - -
Aed9g1477 501 Pfam Protein tyrosine and serine/threonine kinase 260 494 IPR001245 GO:0004672|GO:0006468
Aed9g1477 501 ProSiteProfiles Protein kinase domain profile. 210 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g1477 501 Pfam Leucine rich repeat N-terminal domain 2 37 IPR013210 -
Aed9g1477 501 Pfam Leucine Rich Repeat 137 154 IPR001611 GO:0005515
Aed9g1477 501 SUPERFAMILY L domain-like 31 172 - -
Aed9g1477 501 Gene3D Ribonuclease Inhibitor 1 167 IPR032675 -
Aed9g1477 501 PANTHER LEUCINE RICH REPEAT KINASE 2 1 69 - -
Aed9g1477 501 PANTHER LEUCINE RICH REPEAT KINASE 2 257 496 - -
Aed9g1477 501 PANTHER LEUCINE RICH REPEAT KINASE 2 68 256 - -
Aed9g1477 501 SUPERFAMILY Protein kinase-like (PK-like) 261 492 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1477 Aed-Chr9 17330911 17337514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1477 258 338 Miscellaneous Gene Families AT4G22730 64.634 2.66e-28 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Aed9g1477 PK_Tyr_Ser-Thr 1.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1477 - - var:108327466 392.119